Phocoena sinus (vaquita): 116759728
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Entry
116759728 CDS
T07759
Symbol
ARHGEF5
Name
(RefSeq) rho guanine nucleotide exchange factor 5 isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116759728 (ARHGEF5)
Membrane trafficking [BR:
psiu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116759728 (ARHGEF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARHGEF5_35
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
116759728
NCBI-ProteinID:
XP_032499671
LinkDB
All DBs
Position
9:complement(11081714..11110007)
Genome browser
AA seq
1588 aa
AA seq
DB search
MNINRGKIGMGPAQDSALMEAEGPQHGAATPIPARVEFSIILAAPMRSRQTPALEAEAEE
GEDPPYQGAERHGLLETQQRRVRDVNDCATEDMTSFPIEASADVETDQESLMAEACESPE
HQEAGPQCPADRQARPPAPPELWACPGQGGYLDTASISELGSSVEVEFKPELTSLILETG
QAEGEEETSPDASAQTRCGPCCEEYPAETNQPQDSESGPTRRESPEREGAACLQKAEELE
RRGLQGEGTLREDVCSDGLSGEQMGEQVSGTEEEQRQNQRRIQDDVMLAERGESKGHSGE
LGGLSSGEWHWRSHGHRDLEQGEQESGELTGPEERKVDAQYEENESLAGKSVKVAGKQED
QGLQGKAMPVEGQEEKAGSSEDVGSGCGDTLGAGGEERHTEEGGERDVLATLALVAPEVS
SPHDLLPDACCPTARIPGTQTEPRAEEPSPVALTPALELVGWSQQLISLPHSFPAAESPD
RETAQYNQRVGSELEKGTASSRGEEGVSVTPPRTAASAPPSPPEVSPGMTASSSAGPQVA
FSRREPWVAACSPETSGASRPTDSPSPCGASESSAAALHGFPSAGQASPQGPPGNHTGVA
QHRRGHSFPGSHGTEPTPDLAGVSLSFSHSELPQRRPKAAIYGSVIPRRGRKGGRDCAII
PGSSSSLPAPGQDSQELASNPARPGSPQSSRPWASTHPSAFAPGSPAHGPSPPTVSVDER
TREPPPPPAPEKRRVRSMVEGDGHRSVVVPTQRRYSHPPLALGLGLHGHPKGPLPRVPDP
LVARQHRPLPSTPDTPDHTQTSFSPKKRYNKPLPPTPDLSQPHPSPVSSSRSSRIYRPLP
LIPVVNPPTEPPPLPPKSRERSRLTQGGLGDSGGQARTRPVCQEWTISPPHSAGRVSWPP
ATGRSTDSSPPASRSKSEVPPGMAFSNMTALVSPAFLTTPWTLEVQGPTSEEPEVPARRS
FRRIFPQEGANGLRRSDLGRTRQPEKPSHPHLEKASSWPHRRDSGRPAEGSSGQVGVPSE
GSSKHKDWHRQGLRRPSILPEGPSGGPAVEKSPSLSDAIVFREKKPKEVMGGFSRRCSKL
INSSQLLYQEYSDVFLNKEIQSQQRLDSLTEAPGPASPQQPRKALVSSESYLKRLSMASS
GSLWQEIPVVRNSTVLLSMTHEDQKLQEAKFELIVSEASYLRSLHIAVDHFQHSEQLRAT
LSNQHHQWLFSRLQDVRDVSTMFLSDLEENFEGNIFTFQVCDVVLSHAPNFRRVYLPYVT
NQTYQERTFQSLLTSNSSFREVLEKLESDPICQRLSLKSFLILPFQRITRLKLLLQNILK
RTQPGSSEEAEATKAHHALEELIRDCNNNVQRMRRTEELIYLSQKIEFECRIFPLISQSR
WLVKSGELTALEFSVSPGLRRKLSARPVHLHLFNDCLLLSRPREGSRFLVFDHAPFSSVR
GEKCEMKLHGPHKNLFRLFLRDNAQGSQAEFLFRTETQSEKLRWVSALAMPREELDLLEC
YESPQVQCLRAYKPRENDELALEKADVVMVTQQSSDGWLEGVRLSDGEQGWFPVQQVEFI
SNPEVRARNLKEAHRVKTAKLQLVEQQT
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaacaggggaaagatcggcatgggtccggctcaggattcagccctgatggaa
gctgaggggccccaacacggagcggcgacccccattcctgccagagtggaattcagtatt
atcctggcagctcccatgagaagcaggcagacccctgccttggaagctgaagctgaagag
ggcgaggatccaccctatcagggggcagagagacacggactcttggagacccagcagaga
cgtgtcagggatgtgaatgattgtgcaactgaggacatgacctcttttcccatcgaagcc
tctgcagatgtggagaccgaccaggaaagcctgatggctgaggcctgtgaatctccagag
catcaggaggcagggccccagtgcccagcggatagacaggcgaggccgccagctccgcca
gagctctgggcctgccccggccagggtggatatctagacacggcctcaatatccgaactg
ggtagcagcgtggaggtggaatttaaaccagagctcacttctttgatattggaaaccgga
caagccgaaggagaggaggaaacttccccagacgcctctgcccagaccagatgtgggcct
tgctgtgaagagtaccctgcggagaccaaccagccacaggactcagaaagtggacctacc
aggcgggaaagtccagagagagaaggggccgcgtgtctccagaaggccgaggagctggag
agacgaggacttcagggggagggaactctgcgggaggatgtttgctctgatgggctttcc
ggggagcagatgggagagcaggttagcggaacagaggaagaacagagacaaaaccagcgg
cggattcaagacgatgtgatgcttgcagaacgaggagaaagcaagggccatagtggggaa
ctgggaggtctgagttctggtgagtggcactggaggtctcacggccacagggatctagaa
caaggggaacaggagagcggggagctgacggggccagaggagaggaaggtggatgctcag
tacgaggagaatgaaagcttagcggggaaatcagtgaaagtcgctgggaagcaagaagat
cagggtctacaggggaaagcgatgccagtagaggggcaggaggagaaggcagggtcgagc
gaggacgtgggcagtgggtgtggggacaccctgggggcagggggagaagagaggcacaca
gaggaaggaggagagcgtgatgttcttgccacactggctctggtagcccctgaggtctct
tctccccatgacttgcttccagatgcctgttgtcccacagccaggatccccgggactcag
acagagcctagggctgaggaaccgtcccctgtagctctgactcctgccctggagctagta
ggatggtcccagcagctcatttctttacctcattcctttcctgccgcggagtcgcctgac
cgagaaacagctcagtacaaccagcgagtgggctctgagctggagaaggggacagcatcc
agccggggagaagagggggtctctgtgacccctccaaggacagcggcgtcagcccctccc
agccctcctgaagtctcccccggcatgactgcctcatcctctgcgggcccccaagtcgcc
ttctccaggagggagccctgggttgctgcatgttctccagaaacgtccggagcctctcga
cccaccgacagcccatctccctgtggggcttctgagagctctgcagctgccctccacggc
ttcccctcagcaggccaggccagccctcagggtcccccaggcaaccacactggggtggcc
cagcaccggcggggccactccttcccgggctctcacgggacagaaccgactccggacctg
gcgggagtatcactctccttctcccactcagagttgccccagagacgccccaaagctgcc
atctatggctctgtgatcccaagaaggggcaggaaaggcggaagggactgtgccatcatt
cccggatcctcaagttcactacccgctccagggcaggactctcaagaattggcctcaaac
ccagcaaggcctggcagcccccaaagcagtcggccgtgggcctccacacatccctcggcg
tttgccccaggatctcctgcccatggcccttccccacccactgtctccgtagatgagagg
acccgtgagcctccaccccctcctgccccagagaagaggcgcgtccgctctatggtggag
ggagacggccatcgctctgtcgtggtccccacgcagagacggtatagccatcctcccctg
gccctaggtttagggctgcacggccaccccaaaggcccactgccccgagttcctgacccc
cttgtggcaaggcagcaccgacccctgccctctaccccggacacccccgaccatactcag
acctctttctctcccaagaaaagatacaacaagccattacccccaactcccgatttgtct
cagccacacccttctcctgtttcttcttcgaggagctccaggatctacaggcctctcccc
ctgatccctgttgtgaaccctcctactgaaccaccaccgttacccccaaagtccagggag
aggagcaggctcacccaggggggactcggagattcagggggtcaggccaggaccaggcca
gtttgtcaagagtggaccatctcccctccccattctgcgggacgtgtctcctggcctccg
gccacgggcagatcgacagactcttcgcctcccgccagtaggagtaagagtgaagtgccc
cctggcatggctttcagtaacatgacagctcttgtaagtcccgctttcctgaccaccccc
tggactctggaggtccagggacccacctcggaagagcctgaggtccctgccagaagatct
ttcagaaggatcttcccccaggaaggagccaatggcctgaggaggtcggatctaggccga
acaaggcagccagagaagcccagccatccccatctggagaaggcgtccagctggcctcac
agacgggactcagggagaccagcggagggcagcagtggacaggtgggggtccctagtgag
gggtcgagtaagcacaaggactggcaccggcagggcctgcgcagaccctccatcctaccc
gagggcccttcaggaggtccagccgtggaaaaatcccctagcctttcagatgccattgtt
tttcgggagaaaaagccaaaggaggtgatgggaggcttttcaagacgttgctccaagctc
atcaattcctctcagctgctttaccaggagtacagcgatgtgtttctgaacaaggagatc
cagagccagcagcggctggacagcctgacagaggcaccggggcccgcctccccccagcag
ccccgaaaggccttggtgtcctcggagtcctacctgaaacgcctctccatggcctccagc
ggctccctctggcaggaaatccccgtggtgcgtaacagcactgtgctgctctccatgacc
cacgaagaccaaaaactccaggaggccaaatttgagctgattgtgtcagaggcctcctac
ctgcgcagtctacatatagccgtggatcatttccaacattcagagcagctccgggccacc
ctttccaaccagcatcatcaatggctcttctctcgtttacaggatgtgcgtgacgtcagc
accatgttcctttcagacctggaagagaactttgagggcaacatcttcaccttccaagtg
tgtgatgtggttctgagccatgcccccaacttccgccgggtctacctgccttatgtcacc
aaccagacctaccaggaacgcaccttccaaagtctgctgactagcaacagcagtttccga
gaggtcctggagaagctggagagtgaccccatctgccaacgcctttccctcaagtccttt
ctcattctgcccttccagcgcatcacccgtctgaagctgctgctccagaacattctgaag
agaacacagcctggctcctcggaggaagcagaggccacgaaggcacaccacgccctggag
gagctgatccgagactgcaataataacgtccagcggatgcgacggacggaggagctgatc
tacctgagccagaagatcgagtttgagtgcagaatattcccgctcatttcacagtcacgc
tggctggtgaagagcggggagctgacggccctggagttcagtgtctccccagggctgcgg
aggaagctgagcgcacgcccagtccacctgcacctcttcaatgactgtctgctgctgtct
cggccccgagagggtagccgcttcctggtatttgaccacgctcccttctcctccgtccga
ggggaaaagtgtgaaatgaagctgcatggacctcacaaaaacctcttccgactcttcctg
cgggacaacgcacagggctcccaggctgagttcctcttccgcaccgagactcaaagtgaa
aagcttcgctgggtctcagccttggccatgccaagagaggagttggaccttctggagtgt
tacgagtccccacaagtacagtgccttcgagcctacaaaccccgagagaatgatgagttg
gcactagagaaggcagacgtggtgatggtgactcagcaaagcagtgatggctggctggag
ggcgtgagactctccgatggggagcaaggctggttccctgtacagcaagtggagttcatt
tccaacccagaggtccgtgcacggaacctgaaggaagcccaccgagtcaagactgccaaa
ctacagctggtggaacagcagacctag
DBGET
integrated database retrieval system
