Phocoena sinus (vaquita): 116759771
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Entry
116759771 CDS
T07759
Symbol
HOXA2
Name
(RefSeq) homeobox protein Hox-A2
KO
K09302
homeobox protein HoxA/B2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116759771 (HOXA2)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116759771 (HOXA2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
116759771
NCBI-ProteinID:
XP_032499739
Ensembl:
ENSPSNG00000014724
UniProt:
A0A8C9CMW6
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Position
9:49418991..49421722
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AA seq
372 aa
AA seq
DB search
MNYEFEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLN
PGSNPRHGAGGRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALPPASAAAATGP
ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE
RQVKVWFQNRRMKHKRQTQCKENQNSEGKFKSLEDSEKVEEDEEEKSLFEQALSVSGALL
EREGYTFQQNALSQQQAPNGHNGDSQSFPVSPLTSNEKNLKHFQHQSPTVPNCLSTMGQN
CGSGLNNDSPEALEVPSLQDFNVFSTDSCLQLSDAVSPSLPGSLDSPVDISADSFDFFTD
TLTTIDLQHLNY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaatttgagcgagagattggttttatcaatagccagccgtcgctcgctgag
tgcctgacatcttttccccctgtcgctgatacatttcaaagttcatcaatcaagacctcg
acgctttcacactcgacactgattcctcctccttttgagcagaccattcccagcctgaac
ccgggcagtaaccctcgccacggcgctggcggccgccccaagccgagccccgcgggcagc
cgcggcagcccagtgcccgccggcgccctgcagccgcccgagtacccctggatgaaggag
aagaaggcggccaagaaaaccgcgctgccgcccgcctcggccgctgccgccaccggccct
gcctgcctcagccacaaagaatccctggaaatcgccgatggcagcggcgggggctcccgg
cgcctgagaactgcttacaccaacacgcagcttttagagctggaaaaagaatttcatttc
aacaagtacctttgcagaccccgaagggtggaaattgcagcgctgctggatttgactgag
agacaagtgaaagtgtggtttcagaaccggaggatgaagcacaagaggcagacccagtgc
aaggagaaccaaaacagcgaaggaaaatttaaaagcctcgaagactctgagaaagtggag
gaggacgaggaagagaagtcgctctttgagcaagccctcagcgtctccggggcccttctg
gagagggaaggttacacttttcagcaaaatgccctctctcagcagcaggctcccaatgga
cacaatggtgactcccaaagtttcccagtttcgcctttaaccagcaatgaaaaaaatctg
aaacattttcagcaccagtcacccactgttcctaactgcttgtcaacaatgggccagaac
tgtggctctggcctaaacaatgacagtcccgaggccctcgaggtcccctctttgcaggac
tttaacgttttttccacagattcctgcctgcagctttcagacgcagtctcgcccagtttg
ccgggttccctcgacagtcctgtagatatttcagctgacagctttgacttttttacagac
acactcaccacaatcgacttgcagcatctgaattactaa
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