Phocoena sinus (vaquita): 116759857
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Entry
116759857 CDS
T07759
Symbol
MINDY4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116759857 (MINDY4)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116759857 (MINDY4)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
116759857 (MINDY4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
116759857
NCBI-ProteinID:
XP_032499925
Ensembl:
ENSPSNG00000010512
LinkDB
All DBs
Position
9:complement(46062051..46179027)
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AA seq
782 aa
AA seq
DB search
MTPSPRQRGHTGPNGPGIWGCGASASWADRSMDSLFVEEVAASLVREFLSRKGLKKTCVT
MDQERPRSDLSINSRNHLRKALHLEVLYKENKAKGNPLKTNLELITRYFLDHFGNTGNDF
TQETPIPALSIPKKSNKLPLRCSETTLVNIYDLASEDASWRTSLSETSKARHDHLNGDVL
GNFASSKRASHKSKPLQTVPGESPPVAPAWEKMDKLQSSEPSLDMKRMGEKIRPKSGLIV
RGMMAGPIASSPQDSFRKRSLRQSPALSSRTQPHEEGSLQAPELSAHTPACPPPVPQEGP
ASSTTSTPRSTLGLLSQLTLEKWRASPSSPPPLPGKGLLQSGSGRWRDLSEDSPAVDSGL
EADRTTLNFSLSSGNAPTTQERLERVFKRQGSQPPALRSNQLPASNKVDGELAVLQLEDV
EDEFLREEVILSPVPSILKLQVESKPIDLSVAKDIKTILFGSSFCCFNEEWKLQNFSFND
SASLRYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSGADCARQLQPSNALRTRCLALAIA
DIVWRAGGHKRAVVTLASRTQQFSPTGKYKADGVLETLILHSLTCYEELVTFLQQSVHQF
EAGPYGCVLLTLSAILSRSTELVRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFN
DVVELDSGNGNVTLLRGIAARSDIGFLSLFEHYSVCQVGCFLKTPRFPIWVVCSESHFSV
LFSLQPELLQDWKAERLFDLYHYDGLATQQGQVRLTIDTTQTVPEDRDNDLVPPLELCIR
TK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgtcgccgcggcaacgcggccatactggccccaacggacccgggatctggggc
tgcggcgcttcggcctcgtgggcagaccggagcatggacagcctcttcgtggaggaggtg
gcggcctccctggtcagggagttcctcagcaggaagggcttaaagaagacgtgtgtgacc
atggaccaggaacgcccacgctctgatctcagcataaacagcagaaaccacctccgaaag
gctttgcatcttgaagttctctacaaggagaacaaggcaaagggaaatcctctaaaaaca
aaccttgaactcatcaccagatattttctggatcactttggaaatactggtaacgatttt
actcaagagacaccaatccctgcactctcaataccaaagaaaagtaacaaattaccattg
agatgctcagagaccacgctggtaaatatatatgaccttgcaagtgaagatgcgagttgg
agaacatcattgtcagaaacaagcaaagccagacacgaccatcttaacggggatgtactt
ggtaattttgcatcatccaaaagggcctcccacaaaagtaagcccttgcagactgtccca
ggtgaaagccctcctgtggctcctgcttgggagaagatggacaagcttcagtcatcagag
ccttccttggacatgaagaggatgggagagaagatcaggccgaagtctggcctgattgtc
cgaggcatgatggccgggcccatcgccagctccccacaggattccttccgcaaacgctcg
ctgaggcagtccccggccttgagcagcaggacccaaccccacgaggaggggagcctacaa
gcgcccgagctgtctgctcacaccccagcctgtcccccgcctgtcccgcaggagggcccg
gcttccagcaccacctccacccccaggagtaccctgggcctgctcagccagctgaccttg
gaaaagtggagagcctcacccagcagccctcctcccctgccaggcaaagggcttctccag
agtgggagcggccggtggagagacctttcagaggacagcccagccgtggacagtggccta
gaggctgacaggaccaccttgaatttctccttgtccagtgggaatgctccgacgacccag
gagaggctggaaagagtgttcaaacggcaggggagccagcccccggccctcaggagtaat
cagttgccagcatccaataaggtcgacggtgagctcgctgtgctgcagcttgaggatgtg
gaggatgaattcctaagggaagaagtcatcctgtctccagtgccatcgatactcaagctg
caagtagagtcaaagcccatcgacctctcagtggcaaaggacataaagaccattctgttt
ggttccagcttttgctgtttcaacgaagaatggaaacttcagaatttttcctttaacgac
tcagcatcattaagatacggcatcgtgcagaacaagggtggtccctgtggggttctggca
gctgtccaaggctgtgtcctacagaaactcctgtttgaaggagatagcggagctgactgt
gctcggcagctgcagccttcaaacgcccttaggacccgctgcctggccctggccatcgcg
gacattgtgtggcgggctggaggccacaagagagccgtggtcacactggcttcgagaaca
cagcagttcagtccaaccgggaaatacaaagcagatggagtcttagaaacactcatactc
cacagtttgacctgctacgaggaactggtgacttttcttcaacagagcgtccatcagttt
gaagcaggcccctatggatgtgtcctgctcaccctgtcggccatcctgtccaggtccaca
gagcttgtccgccaggacttcgacgtccccaccagccacctgattggagcacacggatac
tgcacgcaggaacttgtcaatctgctcctgaccgggaaagccgtgtccaatgtcttcaac
gacgtggttgagctcgattccgggaacgggaacgtcacgctcctcagaggcatcgccgcg
cgcagcgacatcggcttcctgtccctcttcgaacactacagcgtgtgccaggtcggctgc
ttcctgaagaccccgcgcttccccatctgggtggtgtgcagtgagagccacttcagcgtc
ctcttcagcctgcagccggagctgctgcaagattggaaggccgagaggctctttgacctg
taccactacgacggcctggccacccagcaggggcaggtccggctgaccatcgacaccacc
cagaccgtccctgaggacagagacaacgacctcgtccctcccctggagctgtgcatcaga
accaagtga
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