Phocoena sinus (vaquita): 116759872
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Entry
116759872 CDS
T07759
Symbol
UBE3C
Name
(RefSeq) ubiquitin-protein ligase E3C isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116759872 (UBE3C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116759872 (UBE3C)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116759872 (UBE3C)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
HECT type E3
116759872 (UBE3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
116759872
NCBI-ProteinID:
XP_032499963
Ensembl:
ENSPSNG00000010638
UniProt:
A0A8C9BWL6
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Position
9:complement(1243830..1364556)
Genome browser
AA seq
1084 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERRKREEERRRLKNAIIIQSFIRGYR
DRKQQYSIQRSAFDRRASLSQSGGTFSIANGPTLTLLVRQLLFFYKQNEDSKRLIWMYQN
LIKYSSLFVQQLDGSERLTCLFQIKRLMSLCCRLLQNCDDGSLNVALPMRMLEVFSSENT
YLPALQDASYVVSVIEQILHYMVQNGYYRSLYLLINSKLPSSIEYSDLSRVPIAKILLEN
VLKPLHFTYNSCPEGARQQVFTAFTKEVLAAPFTEQVFHFVIPALADVQTVFPYEPFLNA
LLSIEGPRSKTSGGAPWLFYFVLTVGENYLGTLSEEGLLVYLSVLQTLLSRLPVSPANTS
CQDSASDSEDESGETDAQTSAPEDGRLSVPYITEECLKKLDTKQQTNTLLNLVWRDSASE
EAFTLMAAICHTLMVQHRVMVPKARLLYSLAFNARFLRHLWFLISSMTTRMITGSMVPLL
QVISRGSPMSFEDSSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEVVGQRQSSMMPFTL
EELIMLSRCLRDACLGIIKLAYPETKPEVREEYIIAFQSIGVTTNSEMQQCIQMEQKRWI
QLFKVITNLVKMLKSRDARRKFCPPNHWLSEQEDIKADKVTQLYVPASRSAWRFRRMGRI
GPLRSTLDVGLESPPLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPF
LDGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNE
LLKSGFNPNQGFFKTTNEGLLYPNPAAQMLVGESFARHYYFLGRMLGKALYENMLVELPF
AGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEGDVEELGLNFTVVNNDLGEAQV
VELKFGGKDIPVSSANRIAYIHLVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQE
IQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIRVFWRVVEGFTDEEKRKLLKFVTSCS
RPPLLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFQDEALLRSKLLYAIECAAG
FELS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttttgaaggggatttcaaaaccaggcccaaggtgtccctgggaggcgcgagc
cggaaggaagaaaaggcttctcttttacatcgtactcaggaagaaagaagaaagagggag
gaagaaagacgaagattgaaaaatgcaataattatccagtcatttattcgaggctataga
gacagaaaacagcaatattccatccagagaagtgcatttgatcgccgggccagcttgtcc
cagtccggtggcactttttccatcgccaacggtcccacccttacccttttggtgaggcag
cttctgtttttttacaaacagaatgaagactcaaaacgcttgatatggatgtatcagaac
ctaattaaatatagctctttgtttgtccagcagttggatggatctgagagacttacgtgc
ttatttcaaataaagaggttgatgagcctctgttgcaggttactgcagaactgtgatgat
ggcagtttgaatgttgctcttccaatgagaatgcttgaggtgttttcctccgagaacacc
tacctgcctgctttacaggatgccagctacgtggtgtccgtgattgaacagattttgcac
tacatggttcagaatgggtattatagatctctctatttgttaattaacagcaagcttcca
tcaagtattgaatattctgatttatctcgagttcctatagcaaaaattttgctagagaat
gttttaaaaccattgcactttacttacaactcctgtccagaaggtgcaaggcaacaagtt
ttcacagccttcacgaaggaggtcctggcagcccccttcacggagcaggtcttccacttt
gtcattcctgctttggccgacgtgcagaccgtcttcccctatgagcccttcctgaatgca
ctgttgtccatagagggtccacgctccaagaccagcggtggagcgccgtggctcttctac
tttgttttaactgttggtgaaaattatttggggaccctgtctgaggagggactgctagtg
tatttgagcgtcctccagaccctcctttctcggttgccggtttcacctgccaacacaagc
tgtcaggattcagccagcgactctgaagatgagagtggagagacagacgcgcagacaagt
gctccagaggatggtagactgtcagtaccctacataaccgaggaatgtctgaaaaagttg
gatacgaaacagcagaccaacaccctgttaaacctggtctggagggactcagccagcgag
gaggccttcacgctgatggcggccatctgccatacactcatggtgcagcaccgagtcatg
gtacccaaggccaggcttctctacagtttagccttcaatgccaggtttctgagacacctt
tggtttctcatatcttctatgacaacacggatgatcacagggtctatggtaccattgctt
caggtgatatcaaggggttctcctatgtcttttgaagattctagtagaatcatcccactc
ttctaccttttcagctccttgtttagtcattcactgatttccatacatgataatgaattc
ttcggtgatcccatagaagttgtaggtcagagacaatcatcaatgatgcctttcacttta
gaagagctgataatgctgtctcgatgccttcgagatgcatgcttagggatcatcaagttg
gcttatccagaaacaaaaccagaagttcgagaagaatatattatagcatttcaaagtatt
ggagttactactaattctgaaatgcagcaatgtatacagatggaacagaaacgatggatc
cagttatttaaggttatcaccaacctagtgaaaatgttgaagtccagagacgcgaggaga
aagttttgtcctcccaatcactggctgtcagagcaagaagatattaaagcagataaggtc
acccagctctacgtcccggcgtccagaagtgcttggaggttcaggcgaatggggaggatt
ggccccctgcggtccaccctggacgtaggtctggagtccccgccactgtctgtgtctgag
gaaagacagctcgccatcctaacagagttgccctttgtggttccgtttgaggagcgagta
aagatctttcaaaggttgatttatgcagataagcaagaagttcaaggagatggtccattt
ctggatggaattaatgtcacaataagaagaaactatatttatgaagatgcttatgacaaa
ctttccccagaaaatgagcctgatttgaaaaagcggatccgtgtgcacttactcaatgca
catggcctggacgaagctggcattgacggtggtggtattttcagagagtttctaaatgaa
ctactgaagtcggggtttaaccccaaccagggcttctttaagaccactaacgaagggctg
ctgtaccccaacccagctgcccagatgcttgtgggggagtcctttgccagacattactac
ttcctgggcaggatgcttggaaaggctctctacgaaaatatgctggtggaattgcccttc
gctggctttttcctgtccaagctgcttggaaccagcgcggacgtggacatccaccacctg
gcgtccttagaccccgaagtgtataagaatttgctgtttctcaagagctacgaaggtgac
gtggaggagctggggttgaacttcactgtggtgaacaacgacctcggagaggcgcaggtg
gttgaactaaaattcggcggaaaagatatcccggtgagcagcgccaaccggattgcgtac
atccacctggtggccgactatcggctgaacaggcagatccgccagcactgcctggcgttc
cggcagggcctggccaacgtggtgagcctggagtggctgcgaatgttcgaccagcaggag
atccaggtattaatttctggtgcacaagttcccataagtctggaggacttaaaatccttt
acaaactattcaggcggctattctgctgatcaccccgtaatcagagtcttctggagagtt
gtggaaggcttcacggatgaggaaaagcgcaaactgctcaagtttgtgacaagctgttcc
cgcccccctctcttggggtttaaggagctgtatcccgcgttctgcattcacaacgggggc
tccgacctggagcggctgcccacggccagcacctgcatgaacctgctgaagctcccagag
ttccaggacgaggcactgctgcggagcaagctgctctacgccatcgagtgcgccgcgggc
ttcgagctgagctga
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