Phocoena sinus (vaquita): 116759879
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Entry
116759879 CDS
T07759
Symbol
PSMC2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03050
Proteasome
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116759879 (PSMC2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116759879 (PSMC2)
09164 Neurodegenerative disease
05010 Alzheimer disease
116759879 (PSMC2)
05012 Parkinson disease
116759879 (PSMC2)
05014 Amyotrophic lateral sclerosis
116759879 (PSMC2)
05016 Huntington disease
116759879 (PSMC2)
05017 Spinocerebellar ataxia
116759879 (PSMC2)
05020 Prion disease
116759879 (PSMC2)
05022 Pathways of neurodegeneration - multiple diseases
116759879 (PSMC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psiu03051
]
116759879 (PSMC2)
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116759879 (PSMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_33
AAA_18
TIP49
RNA_helicase
Mg_chelatase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
116759879
NCBI-ProteinID:
XP_032499974
Ensembl:
ENSPSNG00000022287
UniProt:
A0A8C9EEQ5
LinkDB
All DBs
Position
9:87090205..87108018
Genome browser
AA seq
433 aa
AA seq
DB search
MPDYLGADQRKTKEDEKEDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggattacctcggtgcagatcagcggaaaaccaaagaagatgagaaagaagacaag
cccatccgagctctggatgagggggatattgccttgctgaaaacttatggccagagcact
tactctaggcaaatcaaacaggttgaagatgacattcaacaacttctcaagaaaattaat
gagctcacgggtattaaagagtctgacactggcctggccccaccagcactgtgggatttg
gctgcggataagcaaaccctccagagtgaacagcctttgcaggttgcgagatgcacaaag
ataatcaatgctgattcggaggacccgaagtacattatcaatgtgaagcagtttgccaag
tttgtggtggacctcagtgatcaggttgcacctactgacattgaagaagggatgagagtt
ggtgtggacagaaataagtatcagattcacattccactgcctcctaagattgacccaaca
gttaccatgatgcaggtggaggaaaaacctgatgttacatatagtgatgtgggtggctgt
aaggaacaaattgagaaacttcgagaagtagttgaaaccccactacttcatccagagagg
tttgttaaccttggcatcgagcctcctaagggtgtgctgctctttggtccaccgggtaca
ggcaagacactctgtgctcgggcagttgctaataggaccgatgcttgcttcattcgagtt
attggatctgaacttgtacagaagtacgtcggtgagggggctcgaatggttcgagagctc
tttgaaatggccagaacaaagaaagcctgccttatcttctttgatgaaattgatgccatc
ggaggggctcgttttgacgatggtgctgggggtgacaatgaagtgcagaggaccatgttg
gaactgatcaatcagctggatgggtttgatcctcgaggcaacattaaagttctgatggcc
acaaacagacctgacactctggaccccgcgctgatgaggcccgggagactggacaggaag
attgagtttagcttacctgatctagagggtcggactcacatttttaagattcatgcccgt
tcaatgagtgttgaaagagatatcagatttgaattgttagcacgactgtgtccaaatagc
actggtgctgagatcagaagcgtctgcacagaagctggtatgtttgccatccgagcacgg
cgaaaaattgctactgagaaggatttcttggaagctgtaaataaggtcatcaagtcctat
gccaaattcagtgctactccgcgctatatgacatacaactga
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