Phocoena sinus (vaquita): 116759995
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Entry
116759995 CDS
T07759
Symbol
SREBF2
Name
(RefSeq) sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116759995 (SREBF2)
04131 Membrane trafficking [BR:
psiu04131
]
116759995 (SREBF2)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116759995 (SREBF2)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116759995 (SREBF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
116759995
NCBI-ProteinID:
XP_032500020
Ensembl:
ENSPSNG00000006495
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All DBs
Position
10:complement(7185977..7246551)
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AA seq
1190 aa
AA seq
DB search
MPPRPARAAQTWRRLAPAGEAVPGGGCWVSWAVTAAPPPRLPERDGRGSSAPSRAMDGSG
ELGGLETMETLTELGDELTLGDIDEMLQFVSNQVGEFPDLFSEQLCSSFPGGGGSGNSGS
SNGGGSGGGAGAGDPSVQRSFSQVPLPSFSPSATSPQAPALQVKAPPTAVPPPPRATPVL
QPRPQPQPQPPAQLQQQTVMITPTFSTAPQTRIIQQPLIYQNAATSFQVLQPQVQSLVTS
SQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLAPATVQTVAAPQVQQVPVLVQPQIIKTD
SLVLTTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVGSNGTILTTMPVMMGQEKV
PIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLR
KAIDYIKYLQQVNHKLRQENMVLKLANQKNKLLKGIDLGSLVDNDVDLKIDDFNQNVLLM
SPPASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLC
LSFNPLTALLQWGGAHDSDQHPHSGSGRSMLSLESGSAGWFDWMMPTLLLWLVNGVIVLS
VFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAANLQTCLSVLGRALPTS
RLDLACSLSWNVIRYSLQKLRLVRWLLKKVFQHRRATLATAAGFEEEAKTSARDAALAYH
RLHQLHITGKLPVGSACSDVHMALCAVNLAECAEEKIPPSTLVEIHLTAAMGLKTQCGGK
LGFLASYFLSRAQSLCGPERSAVPDSLRWLCHPLGQKFFMERSWSVKSAAKESLYCAQRN
PADPIAQVHQAFCRNLLERAVESLVKPQAKKKAADQEEESSEFSSALEYLKLLNSFVDSV
GIVTAPFSSSCVLKSALGPDVVCRWWTSAITMAISWLQGDDAAVRTHFTEVERVPKALEV
TESPLVKAVFHTCRAMHASLSGKADGQQSSFCHCERASGHLWSSLNVSGAACDPALSHVV
QLLTCDLLLSLRTALWQKQAGASQALGETYHASGAELAGFQRDLGSLRRLAHSFRPAYRK
VFLHEATVRLMAGASPTRTHQLLEHSLRRRTAQNAKQGEADAWPGQRERATAILLACRHL
PLSFLSSPGQRAVLLAEAARTLEKVGDRRSCSDCQQMIVKLGGGTAIAAS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccgccccgcccgcgcggcgcaaacatggcggcggctggcaccggccggtgag
gcggtacccggcgggggctgttgggtgtcatgggcggtgacggcggcaccgcccccgcgt
ctccctgagcgggacggcaggggttcctctgcaccgagccgggcgatggacgggagcgga
gagctgggcggtctggagaccatggagacgctcacggagctgggcgacgagctgacccta
ggggacatcgacgagatgctgcagtttgtcagcaatcaagtgggagagttccctgacttg
ttctcagagcagctgtgcagctccttccctggcggtggtggaagtggcaacagcggcagc
agcaatggcggcggcagcggtggcggagccggagccggggacccctcggtgcagcggtcc
ttcagccaggtcccgttaccgtccttctcgccctcggctacctccccccaggctccagcc
ctacaagtcaaggctccccccaccgcggttccccctccgccaagggcaactcctgttctt
cagccccgcccccagccccagccccagcctccagctcagctgcagcagcagacagtaatg
atcaccccgaccttcagcaccgctccccagacgaggatcatccagcagcctttgatatac
cagaacgcagctaccagctttcaagtccttcagcctcaagtccaaagcctagtgacatcc
tcccaggtgcagccggtcaccatccagcagcaggtgcagacggtgcaggcccagcgggtg
ctgacgcagacagccaatggcacgctgcagaccctcgccccggccacggtgcagacagtt
gctgcgccccaggtgcagcaggtcccggtcctggtacagcctcagatcatcaagacagat
tcccttgttttgaccacactgaagacagatggcagccctgtgatggccgcagtccagaac
ccagccctcactgccctcaccacccccatccagacagctgcccttcaagttccgaccctg
gtgggcagcaatgggaccattctgaccacaatgcctgtgatgatgggacaagagaaagtg
cccattaagcaggtacctgggggagtcaagcagctcgagccccccaaggaaggagaaagg
aggacgacacacaacatcattgagaagcggtatcgctcctccatcaatgacaaaatcatt
gagttgaaggacctggtcatggggacagatgccaagatgcacaagtctggcgttctgagg
aaggccattgactacatcaaatacttgcagcaggtcaatcataaactgcgccaggagaac
atggtgctgaaactggcaaatcagaagaacaagctcttgaagggcattgacctaggcagc
ctggtggacaatgacgtggacctgaagatcgatgactttaatcagaatgtccttctgatg
tcgcctccggcctccgactcggggtcccaggcaggcttctccccctactccatcgactct
gagccaggaagccctctattggatgacgcaaaggtcaaagatgagccagactctcctcct
gtagcacttggcatggtggaccgctcgcgaatcctgctgtgtgtcctcaccttcctgtgc
ctctcctttaaccccctgactgctctgctgcaatggggaggggcccacgactcggaccag
catccacactcaggctctggccgcagcatgctgtctctcgagtcaggttctgcgggctgg
tttgactggatgatgccaacgctcctcttgtggctggtgaacggtgtgattgtcctgagc
gtctttgtgaagctgctggtccacggggagccagtgatccggccgcattcgcgctcctca
gtcaccttctggaggcaccggaagcaggcagacctggacctggcccggggggattttgca
gctgccgctgcaaacctgcaaacctgcctgtcggtgttgggccgggcactgcccacctcc
cgcctagacctggcctgcagcctctcctggaacgtgatccgctacagcctgcagaagctg
cgcctggtgcgctggctgctcaagaaggtcttccagcaccggcgggccaccctggccact
gccgcaggctttgaggaggaagctaagaccagcgctcgggatgcagccctggcctatcac
aggctgcaccagctgcacatcacaggcaagcttcctgtgggatctgcctgttcagatgta
cacatggctttgtgcgctgtgaacctggctgaatgtgcagaggagaaaatccccccgagc
acgctggttgagatccatctcacggccgccatggggctcaagacgcagtgtggaggcaag
ctgggcttcctggcgagctacttcctcagtcgcgcccagagcctgtgtggccccgagcgc
agcgctgttcccgactcactgcgctggctctgccaccccctgggtcagaagtttttcatg
gagcggagctggtccgtgaagtcggctgccaaggagagtctgtactgtgcccagaggaac
ccagctgaccccatcgcccaggtgcaccaggccttctgcaggaacctgctggagcgagct
gtggagtccttggtgaaacctcaggccaagaagaaagctgcagaccaggaagaggagagc
agtgaattctccagtgctctggagtacctgaaattacttaattcttttgtggactctgtg
gggattgtgaccgcccccttctccagcagctgtgtgctcaagtcagcccttggtccagac
gttgtctgtcggtggtggacgtccgcgatcaccatggccatcagctggctccagggagat
gacgcagctgtgcgcactcactttaccgaagtggagcgtgttcccaaggccctggaagtg
acagagagccccctggtgaaggccgtcttccacacctgcagagctatgcacgcctcactc
tccgggaaggcggacgggcagcagagttccttctgccactgcgagagggccagtggccac
ctgtggagcagcctcaacgtcagtggggccgcctgcgacccagccctcagccatgtggtc
cagctgctgacctgtgacctgctcctgtcgctgaggacagcactctggcagaaacaagca
ggagccagccaggccctgggtgagacctaccatgcgtcgggcgctgagctggctggcttc
cagcgggacctgggcagcctgcgcaggctggcacatagcttccgcccggcctaccgcaag
gtgttcctgcatgaagccactgtgcgtctgatggcgggggccagccccacccgtacccac
cagctgctggagcacagcctgcgacggcgcaccgctcagaacgccaagcaaggagaggcg
gacgcctggcccggccagcgagagcgggccaccgccatcctgctggcctgccgccacctg
cccctctccttcctctcctccccgggccagcgggcggtgctgctggccgaggccgcccgc
accctggagaaggtgggcgaccggcgctcgtgcagcgactgccagcagatgattgtcaag
ctggggggcggcactgccatcgccgcctcctga
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