Phocoena sinus (vaquita): 116760125
Help
Entry
116760125 CDS
T07759
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116760125 (UTP20)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116760125 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
DUF7051
MBTPS1_3rd
Motif
Other DBs
NCBI-GeneID:
116760125
NCBI-ProteinID:
XP_032500386
Ensembl:
ENSPSNG00000008109
UniProt:
A0A8C9BLY7
LinkDB
All DBs
Position
10:complement(20445783..20542745)
Genome browser
AA seq
2781 aa
AA seq
DB search
MKPKPVSHKIENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQVKNSYAYQPLLDLVVQLARDLQM
DFYPHFQDFFLTIASILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSNIYSMYSTFLAH
RKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPEKVEGVGQLLFEMCKGVRNMFH
SCTETAVKLILQKLGPVTETETQLPWTLVGETLKNMVKSTAFYIYKEHFGIFFECLQESL
LDLHTKVTKTNCGESSEQFKRLLETYLILVKHGNGSKITNPVDVCKVLSQTLQIAHLSTS
CRATLLDVISALILGENVSLPVTLIKETIEKIFESRFERCLILGFSEVMFAMKQFEQLFL
PSFLLYIENCFLTDDAAVKDEALAILAKLILNKAAPPTTGSMAIEKYPLLFSEQTVGSSI
RQKKTRSKGGKEQISVLDHLLSIIQLPPNKESTYLSCSWAALVVLPHIRPLEKEKVIPLV
TCFIESLFMTVDRGSFGKGNLFVLCQAVNTLLSLEESSELLHLVSVERVKNLVLAFPLEP
SVLLLADLYYQRLSLCGCRGPLSEEALMELFPKLRANISTGISKIRLLTIRILNHFEVRL
PELMEDDELSERQSVFAILRQAELVPATVNDYREKLLHLRKLRHDVVQTAVPDGPLQEVP
LRYLLGMLYVNFSALWDPVIELISSHAREMENKQFWKVYYEHLEKAATHAEKELQNDTRD
EERSIGDASWEQTQEGNVGTLYHEQFALKTDLQERLDHTNFRFLLWRALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGLGAEEIEEEPVAGEDEELGEELAPQD
EPSQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQMVQKITLDC
IMTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNAVVKAAHRADLFPVLMRILYGR
MKNKTGSKTQGKSASGTRMSIILRFLAGSQPEEIHIFLDLLFEPVKHFKNGECHSAVIQA
VEDLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILDQREK
IQLRFINPLKNLRRLGIKMVTDIFLDWESYQFRTEEIDAVFHGAVWPQISRLGSESQYSP
TPLLKLISIWCRNARYFPFLAKQKPGHPECDILTNVFAILSAKNLSEATASIVMEIADDL
LSLPDFEPTETVLSLPVTGCVYTESADESITIGGRLILPRVPAILQYLSKTTISAEKVKK
KKNRAQVSKELGILSKISKFMKEKEQSSLLITLLLPFLHRGSIAQDTEVDILVTVQNLLK
HCLEPTSFLKPLAKLFSVIKNKLSRQLLCTVFQTLSDFDSGLKYITDVVKLNAFDQRHLD
DINFDVRFSAFQTITSYIKEMQTVDVNYLIPVMHNCFYNMELGDMSLSDNASMCLMNIIK
KLAALNVTEKEYREIIHRSLLEKLRKGLKSQTESIQQDYTTLLSCLIQTFPDQPEFKDLV
QLTDCHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKIVLSSKSLQNYIMPYAMAPIF
DEKMIKHENITIAATEVIGAICKHLSWSAYIYYLKHFIHVLQAGQINQKLGVSLLVIVLE
AFHFDHKTLEEQMRKLQREENTIEEIELPEHEAMELEHMDDDEKEDGCKTLSDKNEELEN
PDPDDCEGTAAKESECITKSISFLPWNKEELEKTIKNIQGTITGDILPRLHKCLASTTKR
EEEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPQEVMEANLPSILLKVCALLKNRAQEI
RDIARSTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTVYMLLQGLTNKLQVGNL
DSCLDIMIEIFNHELFGAIAEEKEVKQILSKVMEARRSKSYESYEILGKFVGKDQVTKLI
LPLKEILQNTTSLKLARKVHETLRRIIAGLLVNQEMTAESILLLSYGLVSENLPLLTEKE
KNPAAPAPDPRLPPQSCLLLPPTPVRGGQKAVVSKKTNMHIFIESGLRLLHLSLKISKIK
SSSEHVLEMLDPFMSLLIDCLGSMDVKVITGALQCLIWILRFPLPSTETKAEQLMKHLFL
LLKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYQITEKQLQVLLAYAEEDIYDITRQ
ATAFGLLKAILSRKLLVPEINDVMRQVSKLAVSAQDEPVRVQCRQVFLKYILDYPLGDKL
RPNLEFMLAQLNYEHETGRESALEMIAYLFDTFPQGLLHENCGMFFIPLCLMMVNDDSAM
CKKMASMAIKSLLNKISLEKKDWLFDMVTTWFGAKKSLNRQLAALICGLFVESEGVTFER
RLGTVLRVIEKEIDPENFTNIMEETEEKAADRLLFSFLTLISKLIKGCNIIQLIKPSETL
SKIWSHVQSHLRHPHSWVWLTAAQIFGLLFASCQPEELIRKRNVKKTKKKLSEPVAISFL
TSDLDQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLEPDSGDEQGNIKED
MEEQEVLGDGLAREDVEEHKACADKNEERSEPATLLWLIRKLSRIAKLEAAYSPRNPLKR
TCIFKFLGAVAMDLGIDKVKPYLPVIIAPLFRELNSTYSDQDPSLKNLSQEIIELLKKLV
GLESFSLAFASVQKQAAEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKKEAKKRKIEFL
RPGYKAKRQKSHSLKDLAMVE
NT seq
8346 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagccagtttcccacaagatcgagaacacttaccggtttcttacgtttgct
gaacgattgggaaatgtgaatatcgatattattcaccggattgatagaactgcaagctat
gatgaggaagttgaaacctacttttttgagggtctgctgaagtggagagaactgaacctt
acggagcactttgggaaattttacaaagaagttattgacaaatgccagtcgttcaatcag
ctagtctatcatcaaaatgagatagttcagagtttgaagactcacctgcaagtcaagaac
agttatgcctatcaaccccttttggatttagttgtacagttggcacgagatctacagatg
gacttctatccccattttcaggactttttcctgactatcgcttcaatcctggagactcag
gacacggagttgttagaatgggctttcacctcactgtcctatctgtacaagtacctgtgg
agactaatggtgaaggacatgtccaatatatacagcatgtatagtacattcctggctcat
agaaagctacatataagaaattttgctgctgaaagctttacttttttgatgagaaaggtt
tctgataaaaatgcacttttcaatttaatgtttcttgatcttgatgaacatccggaaaaa
gtagaaggagttggacagttgctctttgaaatgtgcaaaggagttagaaatatgtttcac
tcctgtacagagacggcagtgaagctaattttgcaaaagctaggaccagttactgaaaca
gaaactcaacttccatggactttagttggagaaacactcaaaaacatggtcaaatctaca
gcgttctacatctacaaggaacattttggtatattttttgaatgtttgcaagaatcactc
ctggatctacatacaaaagtaaccaagactaactgtggggaaagttctgaacagtttaaa
aggttgttagaaacatatctgatacttgtaaaacatggaaatggatcaaagataaccaac
cctgttgacgtttgtaaagtgttgtctcaaacattacaaatagcccatctctccacatct
tgccgggcgaccctcttggatgtaatttctgctttgatcctaggtgaaaatgtttccctg
ccagtgaccctcatcaaagaaaccatagaaaaaatttttgagagcagatttgaaagatgc
ttaattttgggtttttcggaagtcatgtttgctatgaagcagtttgagcagctttttcta
cccagctttctcttgtatattgagaattgcttcctgactgatgacgctgcagtcaaagat
gaagctctggccattttggccaaactcattctgaacaaagcagcacctcccaccactggc
tccatggcgattgagaagtaccctctgcttttctcagaacagacagtgggatccagtata
aggcagaagaagaccagatccaagggaggaaaggaacagatctcagtattagatcatctt
ttatctataattcagttacccccaaataaagagagtacttacctttcatgctcttgggcg
gcccttgtcgtgttacctcatattagacccctggagaaagagaaggtgatacccctagtc
acctgcttcatagagtcactcttcatgactgttgacagagggagctttggaaaaggaaac
ctatttgttctttgtcaagctgtaaatactctgctaagtttggaagaatcttctgaactt
cttcatctggtttctgtggaacgtgtgaagaacttagtattagcgtttcctttggagccg
tctgtgttgctgttggctgatctctattatcagagattatccttatgtggctgcaggggg
ccactttcagaggaagctctaatggaattatttcccaagttacgagcaaacatttcaact
ggcatatccaagattcggcttttgacaataaggatcctaaaccactttgaggttcggctt
ccggaattaatggaggatgacgagctctcagagcgtcagtctgtctttgctatattacgc
caggcagaacttgtgccagcaactgtgaatgattacagagagaagcttcttcatttgaga
aaactaagacatgatgtggtacagactgcagtccctgatgggccattacaggaggtgcca
cttcgttatctgttaggcatgttatatgttaacttcagtgctctctgggatcctgttatt
gaactcataagttctcatgcacgtgaaatggaaaataagcaattttggaaagtctactat
gaacatctagaaaaagcagctacacatgctgagaaagagctgcaaaatgacacaagagat
gaggagaggtccattggagatgcaagttgggagcagactcaggaaggaaacgttggaact
ctttatcatgagcagttcgcattgaaaactgaccttcaggaaagactggaccataccaat
tttcggtttttgctctggcgagctctggcaaaattcccagaaagggtagagccacggtcc
agggagctttccccgcttttcttgagatttatcaacaatgagtattacccagcagatctg
caagttgcaccaacccaggatctgcgaagaaaaggcagagggctgggggcagaggaaata
gaagaggaacctgttgccggagaggatgaagagttgggggaagagctggcgccccaagat
gaaccctcacaaaagaaaaagacaagaagagctgcggccaagcagttaattgctcatttg
caagttttctctaagttttcgaatccacgagccttatatctggaatccaaattatatgag
ctgtatcttcagttgttgctacaccaagatcaaatggtgcaaaaaataacactggattgc
ataatgacgtataaacatccacatatcctcccttacagggaaaacttacaaagattgctt
gaagacagaagctttaaggaagagatagtgcattttagcatttctgaagataacgcagta
gtgaaagcagcccaccgagcagatctgtttcctgttctgatgagaattttgtatggccga
atgaagaataaaactgggagtaaaactcaggggaaatctgcttctggcacccgcatgtcc
atcattctgaggttcctcgctgggagccagcctgaagagatccacatattcttagacctg
ctgtttgagcctgtgaagcacttcaagaatggagaatgccattctgctgtcattcaagca
gtagaagatttggatttgtctaaagttcttcctttgggtcgtcagcacggtatcttaaat
agccttgagatagtattaaagaacattagtcatctgatcagtgcatacttaccaaagatt
ttgcagatactgctctgcatgaccgcaactgtatcccacatccttgatcaacgagaaaag
atacagctgaggtttattaacccactgaaaaatttaagacgtcttggaatcaaaatggta
actgatatctttttggactgggagtcctatcagttcagaacagaagaaattgatgctgta
tttcatggtgcagtttggccccagatcagcaggcttggatctgagagtcagtattctcct
actcctctgctgaagctaattagtatctggtgcagaaatgcaagatatttccctttcctg
gctaaacagaaacctgggcacccggaatgtgatatcctgaccaatgtttttgcgattctc
tcagcaaagaacctctctgaagccacagctagtattgtgatggaaatagccgatgacctt
cttagccttccagattttgaacccacagaaacagttttgagcttaccggtgacaggatgt
gtatacacagaaagtgcagatgagtctatcacgataggaggacgattaattctacctcgt
gtacctgcaattctccagtatctcagcaaaaccacaataagtgcagaaaaggtgaaaaag
aagaagaatagagcacaagtcagtaaggaactgggcattctttcaaagatcagcaagttt
atgaaagaaaaagaacaaagttctctgctcattacactgctcctgcctttcctccaccgt
ggcagtattgctcaggatacagaggttgatattctggtgacagtacaaaacctgttgaaa
cattgtctggagcctacgagcttcctcaagcctctagcaaaactcttctcagttattaag
aacaagttgtcaagacagttgctttgtacagttttccagactctttctgattttgatagt
ggattaaaatacattactgatgttgtcaagcttaacgcctttgatcaaagacatcttgat
gatatcaactttgatgttcgcttctcagcgttccagaccatcacctcttatattaaagag
atgcaaactgtggacgttaactacctaattcctgttatgcataattgtttctataacatg
gagttaggagacatgtctttaagtgataatgcaagcatgtgcttgatgaatatcatcaaa
aagcttgctgctttgaatgtcacagagaaagaatatagagaaatcattcatcgttcactc
ctggagaaactgaggaaaggattgaagagccagacagagagtattcaacaagattatacc
acgctgctttcctgtttaattcaaacctttccagatcaaccagaatttaaagacttggta
cagctaactgattgccatgatccagaaatggacttctttgagaatatgaagcacattcag
atccacagaagagcaagagccttgaagaaattggcaaaacaactaatggaaggcaaaatt
gtgctgtcttctaaatctcttcagaattacatcatgccttatgccatggctccaattttt
gatgagaaaatgatcaagcatgaaaatataaccattgctgccacagaggttattggagct
atttgcaaacatctctcttggtcggcatatatatattacttgaaacatttcattcatgtc
ttacaggcgggacagatcaatcaaaagttgggtgtcagtttgctagtgatagtgttagaa
gcattccactttgaccacaaaactctggaagaacaaatgagaaaacttcagagggaagag
aataccatagaagagattgagttgccagagcatgaagccatggaattagagcatatggat
gatgatgagaaggaagatggatgtaagactttgtcagacaagaatgaagagctagaaaac
cctgacccagatgattgtgaagggacagcagctaaagaatccgagtgtatcacgaagtcc
atctctttccttccttggaataaggaagaattggagaaaacaattaaaaatatccaagga
accataactggggacatcctacccaggctccataaatgtctggcatctacgactaaaaga
gaagaagaacacaaactcataaaatcaaaggttgtgaatgatgaggaagtagttcgagtt
cctttagcttttgccatggttaaactaatgcagtcccttccacaggaagttatggaagct
aatctgccaagtattttgctgaaagtgtgtgccctcctcaagaacagagcacaggaaatc
agagacattgctcgcagcactctcgcaaaaataatagaggatctgggtgtgcattaccta
caatatattttaaaagaattacagactacccttgtgcgtggctatcaggtccatgtgcta
actttcactgtttacatgttgctgcaaggcctcaccaacaagctgcaagttgggaatttg
gactcttgtttggatataatgattgagatttttaaccatgagttgtttggtgccattgct
gaagaaaaggaagtaaagcagatcctctccaaggtcatggaggcacgaagaagcaagagt
tatgagtcttatgaaatcttgggcaagtttgtaggaaaagatcaagttacaaaacttatc
cttccactaaaagagatcttgcaaaataccacgagtttaaaactggcccggaaagttcat
gaaaccttacgtcgaatcatagcaggattacttgtaaaccaggaaatgacggcagaatcc
attctgttgcttagttacggtttggtcagcgaaaatctacccctgttaacagagaaggaa
aaaaatccagcagcccctgcaccagatccacgtctgccaccccagagttgtcttctgctc
cccccaactccagttcgaggcgggcagaaagctgttgtgagcaagaaaaccaacatgcac
atatttattgagtctggacttcggctgttgcatcttagtctgaagatttcgaagatcaag
tcttcaagtgaacatgttctggaaatgttggatccttttatgtctctcctcatagactgc
ctgggttccatggacgtgaaggtgatcacaggtgctttacaatgcctgatctggatcttg
aggttccccctgccttccacagaaacaaaagcggaacagctaatgaaacaccttttcctt
ctgctgaaggactatgcaaaactcggggctgccaggggccagaatttccacctggtggta
aattgtttcaagtgtgtgaccatacttgtgaagaaagtgaagtcttaccagataactgaa
aagcagcttcaagttctactagcatatgctgaggaggacatttatgatattacaagacaa
gccaccgcgtttggtcttctgaaggccattttatcaagaaagttgttggtcccagaaatc
aatgatgtcatgcgccaagtgtccaagctggcggtttctgcgcaagacgaacctgtcaga
gtccagtgcagacaggtttttctgaaatatattcttgactatcccctgggggacaaattg
cgaccaaacttggaattcatgctcgctcaactgaattatgaacacgagaccgggagagag
tccgccttggaaatgatcgcttatctctttgacacattccctcagggactgctccacgag
aactgtggaatgttctttattcctctttgtctgatgatggtgaacgatgactctgccatg
tgtaaaaagatggcatccatggcaatcaaatccttactcaataaaatcagccttgagaaa
aaagattggctcttcgatatggttaccacctggtttggggcaaagaagagcttgaataga
cagctagctgccctgatctgtggcttgtttgtggaaagtgaaggagtcacttttgagaga
agacttggaactgttctccgtgtaattgaaaaggaaattgatcctgaaaactttacaaat
atcatggaagagactgaagaaaaagctgcagatcgccttctgtttagttttcttacactg
ataagtaaactcatcaagggatgtaatattattcagcttatcaagccctctgagactctg
agtaaaatctggagtcacgtgcagtcccatctgagacatccgcacagctgggtgtggctc
accgcagcccagatttttggattgctctttgcctcttgccaaccggaggaacttatcaga
aaacggaatgtcaaaaaaactaaaaagaaactctcggaacctgtagcaatcagcttccta
acaagtgacctagaccaaaagatgaaaagtatctccctagcctcttgccatcagttgcac
tccaaattcttggatcagtctctaggagagcaggttgttaagaatttgttgttcgtagcc
aaagtcttatatttactggaacctgattctggggatgagcaaggtaacataaaagaagac
atggaagaacaggaagttttaggtgatggcctggccagagaggatgtggaagaacacaag
gcgtgtgcagacaagaatgaagagcggagcgagccagccacgctgctgtggttgatacgg
aagttgtcccggatcgcaaaactggaagctgcttattcacctagaaacccgttaaagaga
acatgcatctttaagtttcttggagctgtagcaatggatcttggaatagacaaggtgaag
ccgtacctcccagtgatcatagctcctttgttccgagaactgaacagcacctattcggac
caggatccttcgctgaagaatctatcccaggaaatcatagaattactgaaaaagctggtt
gggctcgagagcttctccttagcgtttgcctctgtacagaaacaggctgctgagaaaagg
gcactccggaaaaagaggaaggctttggagtttgtaactaatcctgatatcgctgccaag
aaaaagctgaagaaacacaaaaataaaaaggaagcaaagaagagaaagatcgagttcctg
cgtccaggctataaggccaagagacaaaagagccacagcctgaaagatttagcaatggtg
gagtaa
DBGET
integrated database retrieval system
