Phocoena sinus (vaquita): 116760140
Help
Entry
116760140 CDS
T07759
Symbol
TUBGCP6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116760140 (TUBGCP6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116760140 (TUBGCP6)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
116760140 (TUBGCP6)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
116760140 (TUBGCP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
116760140
NCBI-ProteinID:
XP_032500420
Ensembl:
ENSPSNG00000017416
LinkDB
All DBs
Position
10:481160..511468
Genome browser
AA seq
1707 aa
AA seq
DB search
MASVPQLVDDLCEALLPAAKAHSGQRRGSRKKAKQSLKRVAYNVLFTSLFQDETRKLQPG
LPRLPVKNRILMLSFDLRVSGLGAEADRLEELVEELEAAHRRPLAELGSVLDLLVRLAGS
GPPRMLRRRRDFFLHSRPVGRDVPYGGYDCADLSGLEADVRSLISGEEYLCRDLVRKTLQ
VMEAAPGTGLPAVGLFSYGDPCGDRFERDTRVSLFGALVHSRTADLDVRLDLPPVPDSAD
LSGLAIKVPSSVDQSEDEGFQSASNLTPDSQSEPGVTPDIDLWDAVLTYEASKRRCWEQV
GCPPGHREEPYLTEAGRAAFDRSCRLCQAGLQVLGGGLLQAPQPVLVKECELVKDALNIL
IGVVSATFSLCQPAQAFAVKRGVHVSGASPESISSVLSEVAECGTHYARLSHFSLQPVLD
SSCGEGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLAIAFLFKKLGRQLRYLAELCGVG
TGLLGAGGGAPGAAFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWV
YSGVFRDVYGEFMIQVNHEYLGFRDKFYWTHGYVLISKEVEDCVPVFLRHVAHDVYVCGK
TINLLKLCCPRHYLCCSDVPVPRVSVIFSLEELKDIEKDCAIYVGRMERVARHSSISKVE
KELRMEIAKQELIVQAREAASRVLSALSDRQLSERMALDAQKREQFQRLKEQFVKDQERR
RAARQEELDDDFSYARELRDRQRRLKALEEQLERKARQALVDHYSRLSAEAARREQRALW
KVQRHRLAGARLRFLLEDQKRVQELLEDMAEGKPPEPLAILPGARFQASFLGPEHPDGGG
SCDPGREGRHEAARDSPDGQSMLTPRPLEPPAAGACGSGPGAGPLSEQAEGPGPFSVGLS
IRDFLPTAQGAEQPVLTSAAPVLDEALQTIGSDLPPLAPSAAADTGPSGPQEYDFRTILR
PSVAAPASPGALQTAGGSLGSEGQRPREDTHAQLDTCVPDGRVALPYAHPPQHPSCQEES
SQAPGQLCGQVAEPGVPTEGYGSGMAPSRPRWNVHGHVSDASIRVGENVWDVAPSRPRWN
VHGHVSDASIRVGENVWDVAPSRPRWNVHGHVSQSSVMLGVLSGEAEPNVPGPPWAPPDR
GSRSGLSLGAQSPAREHEPRLPAETASGGSGRGEETGLPDLLSAEAAPTALGDSIPEEPG
PGASGDSQDFSPSGPPSSQVRADGVRGWGPGVGVACAAGGPPAPAWPVVGSEGSALALGS
TRGMPPAWSVLSHSRGTGGLLEAGLSQEGVDTRSSPGPGEEAAQRWDREQAYLAGLVGQY
CLERYPDSYEAMSEPPVARLLHHGLPRAFALPEDPGAQSDADASAVQLSELLPLPVLMKH
SITAPLAAHVSLVNKAAVDYFFVELHLGAHFEALRHFLLMEDGEFAQSLSDLLFEKLGAG
QTPGELLSPLVLNSVLSKALQYSLHGDTPHAANLSFALKFLPETFAPNAPDVLSCLELRY
KVDWPLNIVVTEGCLSRYSGIFSFLLQLKLMMWTLKDVCFHLKRTARVSHAAGSVQFRQL
QLFKHEMQHFVKVIQGYIANQILHVTWCEFQARLASVGDLEEIQRAHAEYLHKAVFRGLL
TEKAAPVMNVIHSTFSLVLKFRSQLIAQPWRGPEHPNFALLQQSYSAFKYYSHFLFKVVS
KLVNRGYQPHLEDFLLRINFNSYYQDA
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgtcccccagctggtggacgacctgtgcgaggccctcctgccggccgcgaag
gctcactctggccagcgccgcgggagccgcaagaaggccaagcagagcctcaagagggtg
gcctacaacgttctgttcacgagcctctttcaagatgagacccgcaagctgcagcccggc
ctcccgagactcccggtgaaaaacaggatcctcatgctgtccttcgacctgcgagtgagc
ggcctgggcgccgaggccgaccgcctggaggagttggtggaggagctggaggccgcgcat
cgccggccgctggcggagctgggatccgtgctggacctgctggtgcggctggcgggcagc
gggcccccgcgaatgctgcggcgccggcgggacttcttcctgcacagccggcccgtcggg
agagacgttccctacggcggctacgactgcgccgacctgagcgggctggaggcggacgtg
cggtcactcatctccggagaggagtatctgtgtcgggacctggtccggaagacgctgcag
gtgatggaggcggcgccgggcaccggcttgcccgccgtcgggctcttctcgtatggcgac
ccctgcggtgacaggtttgagagggacacccgcgtctcgctctttggagccctggtgcac
agccgcacggccgacctggacgtccgcctggacctgcccccggtgccggacagcgcagac
ctctccggactggccatcaaggtcccttcgagtgtggatcagtcggaagatgaagggttc
caatcagcatccaatctgactcctgattcccagtcagagccgggcgtgactccagacatt
gacctgtgggacgccgtgctcacctacgaggccagcaagcggaggtgctgggagcaagtt
ggatgcccgcctggccaccgagaggagccctacctcaccgaggctggaagggccgccttc
gacaggtcctgccggctctgccaagcagggctgcaggtgctgggcgggggcctcctgcag
gccccgcagcccgtcctggtgaaggagtgcgagctggtgaaggacgcgctcaacatcctg
attggggtcgtgtccgccacgttttccctctgccagccagcgcaggccttcgcggtgaag
cggggtgtccacgtctcaggagcgtcccccgagagcatcagcagcgtcctctcggaggtg
gccgagtgcgggacccactacgcgcgcctgagccacttctctctgcagcccgtgctggac
tcctcgtgcggcgagggcctcgtgttccaggccttcaccagcggcctgaggaggtacctg
cagtactaccgggcctgtgtgctctccaccccgcccaccctgagcctcctcgccattgcc
tttctcttcaagaaactgggccggcagctcaggtacctggctgagctctgcggtgtcggc
actggactcctgggcgctgggggcggagcgcccggggctgcgttccccactggggtgaag
ctgctctcctacctctaccaggaggccctggataactgcagcaacgagcactacccggtc
ctgctgtctctgctgaagaccagctgcgagccctacacgcggttcatccacgactgggtg
tacagtggggtcttcagagacgtttacggcgagttcatgatccaggtgaaccacgagtac
ttgggcttcagagataagttttactggacccacggctacgtgctcatttccaaagaggtg
gaggactgcgtccccgtgttcctgaggcacgtcgcccacgacgtgtatgtctgcgggaag
accatcaacctgctgaagctctgctgcccccggcattacctctgctgctccgatgtcccg
gtccctcgcgtctcggtgatattctccctcgaggagctgaaggacatcgagaaggactgt
gccatctacgtgggccggatggagagggtggcgcgccacagctccatcagcaaggtggag
aaggaattacgaatggaaattgcaaagcaagaattaattgtccaggcccgggaagcggca
tccagggtcctgagcgcgctcagcgatcggcagctgtctgagcggatggccttggatgcc
cagaagcgagagcagtttcagaggctgaaggagcagtttgtgaaggaccaggagcgccgc
cgggcggccaggcaggaggagctggatgacgacttcagctacgcccgtgagctccgggac
cggcagaggaggctgaaggccctggaggagcagctggagaggaaggccaggcaggcactc
gtggatcattacagcaggctgtcggcagaggcagctcgtcgggagcagagggcgctgtgg
aaggtccaaaggcacagattggccggcgctcggcttcgttttctcttagaagatcagaaa
cgcgttcaggagctgctggaagacatggcggaggggaagcccccggagccgctggccatc
ctcccgggtgcccgcttccaggcttcctttctgggccctgagcacccggacggaggcggc
agctgtgatcctgggcgtgaggggcggcatgaggctgcccgggacagccccgacgggcag
agcatgctgacgccgcggcccctcgagcctccggcagctggggcctgcggctcagggccg
ggagcaggcccgctgtcagagcaggcggaggggccggggccgttctctgtgggcctcagc
atccgagacttcctgcccacggcccagggggctgagcagcctgtgctcaccagcgcggcc
cccgtcctggacgaggcactgcagaccattggctcggacctgccccccctggctccgtct
gcggcagcggacacagggccctccgggccacaggagtacgatttcagaaccatcctgagg
ccgtctgtggccgccccagcttccccaggggccctccagactgcaggaggcagcttgggc
agtgaggggcagcggccgcgggaggacactcacgcacagctggacacgtgtgtcccagat
gggcgggtggctctgccttacgcgcaccccccccagcacccctcctgccaggaggagagc
agccaggccccggggcagctctgtgggcaagtggcagagcctggtgttcccacagagggt
tatggttctggaatggctccctcccggccacggtggaacgtccacggacacgtgtctgat
gccagcatcagggtgggggagaacgtgtgggatgtggctccctcccggccacggtggaac
gtccacggacacgtgtctgatgccagcatcagggtgggggagaacgtgtgggatgtggcc
ccctcccggccacggtggaacgtccacggacacgtgtctcagtccagtgtgatgctgggg
gtgctctcaggggaagccgagcccaacgtgcccgggcccccctgggcgccccctgaccgt
gggtcccggtcaggcctcagcttgggagcccagagccctgcccgggaacatgagccacgg
ctgcctgcagagacggcctcaggcggctctggccgtggggaggagactggcctgccggac
ttgctgtctgcggaggctgcgcccactgctctgggagacagtatccctgaggagccaggc
ccgggggcgagtggggactcccaggacttctctccaagtggccctccgagctcacaggtc
agagcagacggggtcaggggctggggaccaggagtcggggtagcgtgtgctgctggtggg
ccccctgcccccgcctggcctgtcgtgggcagtgagggctccgccctggcactgggcagc
acgcgggggatgccccccgcctggtccgtcctctcccactcgaggggaacaggcgggctc
cttgaggctgggttgtctcaggagggcgtggacacccggagcagcccaggccctggcgag
gaggcggcccagcgctgggacagggagcaggcctacctggcgggcctggtggggcagtac
tgcctggagcggtacccggacagctacgaggccatgtcagagcctcccgttgcccgcctc
ctgcaccacgggctgccccgagctttcgccctccccgaggaccccggggcccagtcagac
gcagacgcgagcgcggtgcagctgagcgagctgctgccgctgcccgtgctcatgaagcac
tccatcacggccccgctggctgcccacgtctccctggtgaacaaggccgcagtcgactac
ttcttcgtggagctgcacctcggggcgcacttcgaggcgctgcggcacttcctgctgatg
gaggacggggagtttgcgcagtccctcagcgacctgctcttcgagaagctcggggcggga
cagacgcctggggagctcctcagcccgctggtgctcaactccgtgctgagcaaggccctg
cagtacagcctgcacggcgacacgccgcacgccgccaacctctccttcgccctcaagttc
ctgcccgagacgtttgcccccaacgccccggacgtgctgagctgcctggagctcaggtac
aaggttgactggcccctcaacatcgtggtcaccgagggctgcttgagcaggtacagcggc
attttctccttcctgttgcagctgaagctcatgatgtggacactcaaggatgtctgcttc
cacctcaagcgcacagcacgggtgagccacgcagccggctcggtgcagttccgccagcta
cagctgttcaagcacgagatgcagcacttcgtgaaggtcatccagggctacatcgccaac
cagatcctgcacgtcacctggtgtgagttccaggccaggctggcctcggtgggcgaccta
gaggagatccagcgcgcccatgccgagtacctgcacaaggctgtgttcaggggcctgctg
acggagaaggcggcgccggtcatgaacgtcattcacagtaccttcagcctggtgctcaag
ttccgcagccagctcatcgcccagccctggcgcggccccgagcaccccaacttcgccctc
ctgcagcagtcctacagcgccttcaagtactactcccacttcctcttcaaagtggtgagc
aagctggtgaaccgcggctaccagccccacctggaggacttcctgctgcgcatcaacttc
aacagctactaccaggacgcctga
DBGET
integrated database retrieval system
