Phocoena sinus (vaquita): 116760142
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Entry
116760142 CDS
T07759
Symbol
HDAC10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform X1
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04613
Neutrophil extracellular trap formation
psiu05034
Alcoholism
psiu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116760142 (HDAC10)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116760142 (HDAC10)
09165 Substance dependence
05034 Alcoholism
116760142 (HDAC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116760142 (HDAC10)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116760142 (HDAC10)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116760142 (HDAC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
116760142
NCBI-ProteinID:
XP_032500427
Ensembl:
ENSPSNG00000017027
LinkDB
All DBs
Position
10:475386..481017
Genome browser
AA seq
677 aa
AA seq
DB search
MGTALVYHEDMTAARLLWDDPECEIECPERLTTALERLQQRGLEQRCLQLAAREASEAEL
GLVHSPEYVALVRGTQALGTGELQTLSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLAG
AVRNGLALVRPPGHHSQRAAANGFCVFNNVAIAAKHAQRQHGLHRILIVDWDVHHGQGIQ
YIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGPGLGFTVNLPWNQVGMGNADYVA
AFLHVLLPVAFEFNPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAV
LEGGYHLESLSQSVCMMVQALLGDPAPPLLGPMVPHGSALESIQSVRVAQAPHWMSLQQQ
GVAPVLSPSSHSPEGRPSSLLLTGRPEFKAAATQDVAALSSLLDQPRLNPTPPVRTAVAL
AAPDAALALPSDVLCEEGSAPQEETQAWARPHEALAQDRALTALGKVLYLLDRILDGQVS
SGIAVTPACAAAATLDVAIRCGLSHGAQRLLCLAVGQLDRPPDLTDDGRNLWLNIGGKEA
AALSVFHVSVPLPGTTGGFLSCVLALVLPLAYSFQPDLVLVALGPAHGLRDPQAALLAAL
LRGPAGGRVLALVDEESTPQLAVVLARVLHGEAAPSLGPFSMASPEDVQALMQLRGQLEP
RWKMLQVASEAGGPGSG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcacttgtgtaccacgaggacatgacagctgcccggctgctctgggacgac
cccgagtgcgagatcgagtgcccggagcgcctgaccacagccctggaacgcctgcagcag
cgtggcctggagcaaaggtgtctgcagctggcagcccgggaggcctcggaggcggaactg
ggcctggtgcacagcccggagtatgtggccctggtgcgggggacccaggccttgggcacc
ggggagctccagaccctgtctggacagtacgatgccgtctacttccacccgagtaccttc
cactgtgcccggctggctgtgggggcggcgctgcagctggtggatgcagtgctggcggga
gctgtgcgcaacgggctcgccctggtgaggcctcctgggcaccatagccagagggctgcc
gccaatggattctgcgtgttcaacaacgtggccatagcggccaaacatgcccagcggcag
cacgggctgcacaggatcctcatcgttgactgggatgtccaccacggccagggcatccag
tatatctttgaggacgaccccagcgtcctttatttctcctggcaccgctatgagcacggg
cgcttctggccctatctccgagagtcggatgcagacgctgttgggcagggcccgggcctt
ggcttcactgtcaacctgccctggaaccaggtcgggatgggaaatgctgactacgtggcc
gccttcctgcacgtgctgttgcctgtggcctttgagttcaaccctgagctggtcctagtc
tccgcgggatttgactcagccatcggggatcccgagggacagatgcaggccacgccagag
tgctttgcccacctcacgcagctgctgcaggtgctggctggtggccgggtctgcgctgtg
ctggagggtggctaccacctggagtcactctcccagtccgtgtgcatgatggtgcaagcg
ctgctgggcgaccctgccccgcccctgctggggcccatggtgccgcatggcagcgccctg
gagtccatccagagtgtccgggtagcccaggcccctcactggatgagcctccagcagcaa
ggtgtggcccctgtactgagtcccagctcccactccccagaggggaggccctcgtctctg
ctgctgaccgggaggcccgaattcaaggcagcagcgacccaggacgtggctgccctgagc
tccctcctggaccagccgcgcctcaatcccacgccccctgtacgcacggctgttgccttg
gctgcgccagatgctgccctggccctgccctctgacgtcctctgtgaggaggggtcagcc
ccacaggaggagacgcaggcctgggccaggccacatgaggccctggcccaggacagggcc
ctcactgcactcgggaaagtcctgtaccttttggacaggatcctggatgggcaggtgagc
agtggcattgcagtcaccccagcctgtgctgcagctgccaccctggatgtggccattcgg
tgtggcctgtcccacggagcccagaggctgctttgtctggctgtggggcagctggatcgg
cccccagatctcacggatgacgggaggaatctatggctgaacattgggggcaaggaggca
gctgccctgtccgtgttccacgtctctgtgccactgccagggacgactggagggtttctg
agctgtgtcctggccctggtgctgcccctggcctacagcttccagcctgacctggtgctg
gtggcgctggggcccgcccatggcctgcgggacccccaagctgcactcctggctgcgctg
cttcggggcccagcggggggccgagtcttggcccttgtagatgaggaatccacaccccag
cttgcggtggtcctggccagggtgttgcatggagaggcagcccccagcctgggtcccttc
tccatggcctccccagaggacgtgcaggccctgatgcagctgagagggcagctggagcca
cggtggaagatgctgcaggtggccagtgaggctggggggccaggctcaggctga
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