Phocoena sinus (vaquita): 116760238
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Entry
116760238 CDS
T07759
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130 isoform X1
KO
K06545
CD163 antigen
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116760238
CD molecules [BR:
psiu04090
]
Proteins
116760238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
116760238
NCBI-ProteinID:
XP_032500699
Ensembl:
ENSPSNG00000004288
LinkDB
All DBs
Position
10:96190894..96222080
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AA seq
1115 aa
AA seq
DB search
MDKLRMVIHENSGSTEFRRCSARLSPFTIAVVSVLSACLVTSSLGGTDKELRLTAGENKC
SGRVEVKVQEEWGTVCNNGWDLATVSVVCRQLGCPTVVKATGWANSSAGSGRIWMDHVSC
RGNESALWDCKHDGWGKHNCTHQQDVGITCSDGSDLEMRLMNGGNRCSGRIEVKFQGQWG
TVCDDNFNRDHASVVCKQLECGSAVSFSGSANFGEGSGPIWFDDLVCNGTESALWNCKHE
GWGKHNCDHAEDAGVICLEGADLSLRLVDGVTECSGRLEVKFQGEWGTVCDDGWDSNDAA
VACKQLGCPTAITAIGRINASEGIGHIWLDSVSCHGHESALWQCKHQEWGKHYCNHNEDA
GVTCSDGSDLELRLKGGGSHCAGTVEVEIQKLIGKVCDRGWGLQEADVVCTQLGCGSALK
TSYQVYSKIKATNTWLFLSSCNGNETSLWDCKNWQWGGFSCDHYDEAKVTCSAHREPRLV
GGDIPCSGRVEVKHGDTWGTVCDSDFSLEAASVLCRELQCGTVVSILGGAHFGEGNGQIW
AEEFQCEGHESHLSLCPVAPRPDGTCRHSRDVGVVCSRYTEVRLVHGKSPCEGRVELKIL
GTWGSLCNSHWDMEDAHVLCQQLKCGVALSTPRGAPFGKGSGQVWRHMFHCTGTERHMGD
CPMTALGASLCSLGQVASVICSGNQSQTLPPCNLSSSDPTSSIFSEESGVPCIGSGQLRL
VNGGGRCAGRIEIYHEGSWGTICDDSWDLNDAHVVCKQLGCGGAINAIGSAHFGEGTGPI
WLDEVDCNGKESRIWQCHSHGWGRHNCRHKEDAGVICSEFMSLRLISETSRDTCAGHLEV
FYNGAWGSVGKSNMSAATVGVVCRQLGCADKGSIIPASSDKTMSRHMWVDNVQCPKGPDT
LWQCPSSPWKKRLASPSEETWISCANKIRLQEGTTNCSGRVEVWHGGSWGTVCDDSWDLD
DAQVVCQQLGCGLALEAGKEAAFGQGTGPIWLNEVKCKGNESSLWDCPALSWGHSDCGHK
EDASVKCSEIAKNEGSLNATGRSSVVALGILGVILFASLTVLLLWIQKRRQRQRLTVSSR
GENSVHQIQYREMNSCLKADDLDLQNSSGDHSEVQ
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactcagaatggtgatacatgaaaactctggatctactgaatttaggagatgt
tctgcccgcttaagtcccttcactattgctgtggtctcagttctcagtgcctgtttggtc
accagttctcttggaggaacagacaaggagctgaggctaacagctggtgaaaacaagtgt
tctgggagagtggaggtgaaagtccaggaggagtggggaactgtgtgtaataatggctgg
gacttggccacagtctccgttgtttgtaggcagctgggatgtccaactgttgtcaaagcc
actggatgggctaattccagtgcaggctctggacgcatttggatggatcatgtttcttgt
cgagggaatgaatcagctctctgggactgcaaacatgatgggtggggaaagcataactgt
actcaccaacaggatgttggaatcacctgctcagatggatctgatttggagatgaggctg
atgaatggaggaaaccggtgctcagggagaatagaggtcaaattccaaggacagtggggc
actgtgtgtgacgataacttcaacagagatcatgcttctgtggtttgtaaacaacttgaa
tgtggaagtgctgtcagtttctctggctcagctaattttggagaaggttctggaccaatc
tggtttgatgaccttgtatgcaatggaactgagtcagctctctggaactgcaaacatgaa
ggatggggaaagcataactgcgatcacgctgaggatgctggagtgatttgcttagaggga
gcagacctgagcctgagactggtagatggagttaccgaatgttcaggaagattagaagtg
aaattccaaggagaatgggggacagtgtgtgatgatggctgggatagtaacgatgccgcc
gtggcctgtaagcaactgggatgtccaactgccatcactgccattggtcgaatcaacgcc
agtgaaggaattggacacatttggcttgacagtgtttcgtgccatggacatgagtctgct
ctctggcaatgtaaacaccaagaatggggaaagcattattgcaatcataatgaagatgct
ggtgtgacatgttctgatggatcagatctggaactgagacttaaaggtggaggcagccac
tgtgctgggacagtggaggtggaaattcagaaattgatagggaaagtgtgtgacagaggc
tggggactgcaagaagctgatgtggtttgcacgcagctgggatgtggatctgcactcaaa
acatcctatcaagtttattccaaaattaaggcaacaaacacatggctgtttttaagcagc
tgtaatggaaatgaaacttctctttgggactgcaagaattggcaatggggtggatttagt
tgtgatcactatgatgaagccaaagttacctgctcagcccacagggaacccagactagtc
ggaggggacattccctgctctggtcgtgttgaagtgaaacatggcgacacctggggcacc
gtctgtgattctgacttctctctggaagcggccagcgtgctatgcagggaattacaatgc
ggcacagtcgtctctatcctggggggagctcactttggagaaggaaacggacagatctgg
gctgaagaattccagtgtgaggggcacgagtcccatctttcactctgcccagtagcaccc
cgcccagacgggacttgtagacacagcagggatgttggagtagtctgctcaagatacacc
gaagttcgcttggttcatggcaagtccccatgtgagggaagagtggagctcaagattctt
gggacctggggatccctctgcaactctcactgggacatggaagatgctcacgttctctgc
cagcagcttaaatgtggagttgccctttctaccccaagaggagcaccttttgggaaagga
agtgggcaggtctggaggcacatgtttcactgcactgggactgagcggcacatgggagat
tgtcccatgactgctctgggtgcatcgctgtgttctttggggcaagtggcctctgtaatc
tgctcaggaaaccagagtcagacgctacccccatgcaatttatcatcctcggacccaaca
agctctattttttcagaagaaagtggtgttccctgcatagggagtggtcaacttcgcctg
gtaaatggaggcgggcgttgtgctgggagaatagagatctatcatgagggctcctggggc
accatctgtgatgacagctgggacctgaatgatgcccacgtggtgtgcaaacagctgggc
tgtggaggggccattaatgccatcggttctgctcattttggggaaggaacagggcccatc
tggctggatgaggtggactgtaatggaaaagaatctcgtatttggcaatgccattcccat
ggctgggggcggcacaactgcaggcataaggaggatgcaggagttatctgctcagagttc
atgtctctgagactcatcagtgaaaccagcagagatacctgtgcaggacacctggaagtt
ttttacaatggagcttggggcagcgttggcaagagtaacatgtctgcagccacggtggga
gtggtatgcaggcagctgggctgtgcggacaaagggagcatcatccctgcatcttcagac
aagacgatgtccagacacatgtgggtggacaatgttcagtgtcctaaagggcctgacacc
ttatggcagtgcccatcatctccatggaagaagagactggccagcccctcggaggagacc
tggatctcgtgtgccaacaaaataagacttcaggaaggaaccactaattgttctggacgt
gtggaggtctggcacggaggttcctggggcacagtatgtgatgactcctgggaccttgac
gatgctcaggtggtgtgtcaacagctgggctgtggcttagctttggaggcaggaaaagag
gcggcgtttggccaggggacggggcccatatggctcaatgaagtgaagtgcaaggggaat
gagtcctccctgtgggattgtcctgccctgtcctggggccacagtgactgtggccacaag
gaggatgcttctgtgaagtgctcagaaattgcaaagaatgaaggatcactaaacgccaca
ggtcgctcatccgttgttgcacttgggatccttggggtcattctgttcgcctctctcacc
gtactcctcttgtggattcagaagcgaagacagagacagcggcttacagtttcctcaaga
ggagagaattctgtccaccaaattcaataccgggagatgaattcttgcctgaaggcagat
gatctggacctacagaattcctcaggagaccactctgaggtacaatga
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