Phocoena sinus (vaquita): 116760254
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Entry
116760254 CDS
T07759
Symbol
LIMA1
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116760254 (LIMA1)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116760254 (LIMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
116760254
NCBI-ProteinID:
XP_032500743
Ensembl:
ENSPSNG00000009785
LinkDB
All DBs
Position
10:63516846..63601689
Genome browser
AA seq
796 aa
AA seq
DB search
MESTPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEEANMEKRRSNTENL
PQHFRRGNLTVLKKKWENPVLGADSLPDSVRNSSTEVRHRDDPPPAEVANSSASGVEADQ
EERVHPRPRIKSPPEALIQYPYPRIEDSEHLKDHSAESKKMENCLGESRHEVGKPEISEN
AEAANKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRSAGGRKISENSYSLDDLEIGPGQ
LSPSSFNSEKSESRRNLEFPRLSETSIKDRMAKYQAAVSKQSSSTNYTAGHLYIYGQYIF
LIIGTWHLLSPAPEWSFLNELRASGGEIKTHKLEQKENVPPGPEVCIAHQDGEKVSASEN
SLAAHSAPAEDESRKLSFLGNSQVKSEFQQLVHPKPLSPDARASGLSESSPPKAVKKFQA
PARETCVECQKTVYSMERLLANKQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ
LFKSKGNYDEGFGHRPHKDLWASKNENEETLERPAQLPNAGETPQSPGVEDAPIAKVGVL
TASMEAKASSPLEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKVSKPKWPPEDEISK
PEAPEDVDLDLKKLRRTSSLKERSRPFTVAASFRTSSVKSPKTLSPSIRKGWSMSEQSEE
FGGGVAAERKQTENANASEKNESVEKTTWPNKGSKGEEAGRRSKEVHSFEMGSENLIENG
ANLDEGDRNLLTQQSSLEPNSKNWSSFADNTSTKEFTTQNQTSQDVGFWEGEVVKELSVE
EQIKRNRYYDEDEDEE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactccatttaatagacggcaatggacttcactatcattgagggttacggcc
aaagaactttctcttgtcaacaagaacaagtcatcggctattgtagaaatattctccaag
taccagaaagcagctgaagaagcaaacatggaaaagaggagaagtaacactgaaaatctc
ccccagcactttagaagggggaacctgaccgtgttaaagaagaagtgggagaacccagtg
ctgggagcagactctctcccagactccgtgcgaaacagcagcaccgaggtcaggcataga
gacgaccctcctcccgctgaagtggcaaacagctctgcctctggggtcgaggctgaccaa
gaggaacgagtccaccccagacctagaatcaaatcgcctcctgaagctcttattcagtat
ccgtacccccgcatcgaggacagtgagcatcttaaagaccactcagcagaaagtaaaaaa
atggaaaattgtctgggagaatccaggcatgaagtaggaaaacccgaaataagtgaaaat
gcagaagctgcaaacaaaatagagaaatacaatgttccgctgaacaggcttaagatgatg
tttgagaaaggtgaaccaactcaaaccaagattcttcgggcccaaagccgaagcgcaggt
ggaagaaagatctctgaaaacagctattctctggatgacttggaaataggcccaggtcag
ttgtcaccttcatcattcaactcagagaaaagcgagagtaggcgaaatctggagttccca
cgcctgtcagaaacctccataaaggatcgaatggccaagtaccaggcagctgtgtccaaa
caaagcagttccaccaactatacagccgggcatttatatatatatggtcagtatattttc
ttaattattggcacttggcatctcctttcccctgctccagaatggtcttttctgaatgag
ttgagagctagtggtggtgaaatcaaaactcataaattggagcaaaaggagaatgtgccc
ccgggtcctgaggtctgcatcgcccatcaggatggagaaaaggtttctgcatctgagaat
agtctggcagcccattccgcgcctgctgaggatgagtcccgtaagctttcattcttaggt
aactcccaggttaagagtgagttccagcagcttgtgcatcccaagccactaagtccagat
gccagagcttccggcctttctgaaagttctcctcccaaagcagtgaagaagtttcaggca
cctgcaagagagacctgcgtggaatgtcagaaaacagtctactcaatggagcgtctcttg
gccaacaagcaggtgtttcacatcagctgcttccgttgttcctattgcaacaacaaactg
agtctaggaacatatgcctctttacatgggagaatctattgcaagcctcacttcaatcaa
ctctttaaatctaaaggcaactatgatgaaggctttggacacagaccacacaaggatctg
tgggcgagcaaaaatgaaaacgaagaaacattggagagaccagcccagcttccaaatgca
ggggagacccctcagagcccaggggtagaagatgcccccattgctaaggttggtgtgctg
actgcaagtatggaagccaaggcctcgtccccgctggagaaagaagacaagccagctgaa
accaagaagttgaggattgcctggccgccccctactgaacttggcagttcaggaagtgcc
ttggaggaagggatcaaagtatcgaagcctaagtggcctcctgaggatgaaatcagcaag
cctgaagctcctgaggatgtagatctggatctgaagaagctaagacgaacttcttcactg
aaggagagaagccgcccgttcactgtagcagcttcatttcgaacctcttcagtcaagagc
cccaaaaccttgtccccatctatcaggaaaggctggagcatgtcagagcagagtgaggag
tttggaggaggtgtagcagcagaaaggaaacaaacggaaaatgccaatgcctccgagaag
aatgagagtgtggaaaaaacaacctggccaaacaagggatctaaaggagaggaggcagga
aggagaagtaaggaagttcacagttttgagatggggagtgaaaatcttatagaaaatggt
gcaaacttagatgaaggtgatagaaaccttctcacacagcagtcttcactagaacccaac
tctaaaaattggtctagctttgcagataacacctccactaaagaattcactactcagaat
cagacatcccaggatgtgggattctgggagggagaagtagtcaaagagctctctgtggag
gaacagataaagagaaatcggtactatgatgaggatgaagatgaggaataa
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