Phocoena sinus (vaquita): 116760256
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Entry
116760256 CDS
T07759
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04150
mTOR signaling pathway
psiu04310
Wnt signaling pathway
psiu04928
Parathyroid hormone synthesis, secretion and action
psiu05010
Alzheimer disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05200
Pathways in cancer
psiu05224
Breast cancer
psiu05225
Hepatocellular carcinoma
psiu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116760256 (LRP6)
04150 mTOR signaling pathway
116760256 (LRP6)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
116760256 (LRP6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116760256 (LRP6)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
116760256 (LRP6)
05226 Gastric cancer
116760256 (LRP6)
05224 Breast cancer
116760256 (LRP6)
09164 Neurodegenerative disease
05010 Alzheimer disease
116760256 (LRP6)
05022 Pathways of neurodegeneration - multiple diseases
116760256 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116760256 (LRP6)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116760256 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
116760256
NCBI-ProteinID:
XP_032500755
Ensembl:
ENSPSNG00000006213
UniProt:
A0A8C9E0B4
LinkDB
All DBs
Position
10:93783500..93969331
Genome browser
AA seq
1614 aa
AA seq
DB search
MGAVLRSLLVCSFCVLLRAAPLLLYANRRDLRLVDAANGKENATIVVGGLEDAAAVDFVF
GHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINTE
IYWPNGLTLDYEERKLYWADAKLNFIHRSNLDGTNRQAVVKGSLPHPFALTLFEDTLYWT
DWNTHSVLACNKYTGEGLREVHSNIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMS
PVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTL
LGDYVYWTDWQRRSIERVHKRSAEREIIIDQLPDLMGLKATNVHRIIGSNPCAEENGGCS
HLCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPNQNLEIQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGEQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKGLNLQ
EYRQHPCTQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELLCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQCIDGALRCNGDANCQDKSDEK
NCEVLCLIDQFRCTNGQCIGKHKKCDHNLDCSDKSDELDCYPTEEPAPQATNTVGSVIGV
IVTIFVSGTIYFICQRMLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSMISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPAILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPHSYRHFAPPTTPCSTDVCDSDYAPSRRIMTSVATAKGYTSD
LNYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtcctgaggagcctcctggtctgcagtttctgcgtgctcctgagagcggcc
cctttgttgctttatgcaaacagacgggacttgcgattggttgatgctgcaaatggcaaa
gagaatgctacgattgtagttggaggcttggaggatgcagctgcggtggactttgtgttt
ggtcatggcttgatatactggagtgatgtcagcgaagaagccattaaacgaacagagttc
aacaaaactgagagtgtacagaatgttgttgtttctggattattgtcccctgatgggctg
gcatgtgattggcttggagaaaaattgtactggacagattctgaaactaatcgtattgaa
gtttctaatttagatggatctttacgaaaagttttattttggcaagagttggatcaacct
agagctattgccttagatccttcaagtgggttcatgtactggacagactggggagaagta
ccaaagatagaacgtgctggaatggatggttcaagtcgcttcattataataaacactgaa
atttactggccaaatggactgactttggattatgaggaacggaagctttattgggcagac
gcaaaacttaatttcatccacagatcaaatctggatggaacaaatcggcaggcggtggtt
aaaggttcccttccacatccttttgccttgacgttatttgaggacacattgtactggact
gactggaatacacactccgttttggcttgcaacaagtacactggcgagggtctgcgtgaa
gtccattctaacatcttttctcccatggatatacatgccttcagccagcagaggcagcca
aatgctacaaatccatgtggaattgataatggtggttgttcccacttgtgtttgatgtct
ccagtcaagcctttttatcagtgtgcttgcccaactggggttaaactcctggagaatgga
aaaacgtgcaaagatggtgccactgaattactgcttttagcccgaaggacagatttgaga
cgaatttctttggatacaccagatttcacagacattgttctacagttggaagacatccgt
catgccattgccatagattatgatcctgtggaaggctatatctactggactgatgatgaa
gtgagggccatacgccgctcattcatagatggatctggcagtcagtttgtggtcactgct
caaatcgcccatcctgatggtattgctgttgattgggttgcccgaaatctttattggaca
gacactggcactgatcggatagaagtgacaaggctcaacgggaccatgaggaagatcttg
atttcagaggacttagaggaaccccgggctattgttttagatcccatggttgggtacatg
tattggactgactggggagaaatcccgaaaattgagcgagcagctctggatggttctgat
cgagtagtgttggttaacacttctcttggttggccaaatggtttagccttggattatgat
gaaggcaaaatatactggggagatgccaaaacagacaaaattgaggttatgaataccgat
gggactgggagacgagtgctagtggaagacaaaattccccacatatttgggtttactttg
ttgggtgactatgtttactggaccgactggcagaggcgtagcatcgaaagagtacacaaa
cgaagtgcagagcgggaaatcatcatagaccagctccctgacctcatgggcctgaaggcc
acaaatgttcatcgaatcattggttccaacccctgcgctgaggagaatgggggatgtagc
catctctgcctctatagacctcagggccttcgctgtgcctgccccattggctttgaactc
atcagtgacatgaagacctgcattgtcccagaggctttccttttgttttcacggagagca
gatatcaggagaatttctttggaaactaacaataataacgtggccatcccgctcactggt
gtcaaagaagcttctgctttggattttgatgtgacagacaaccgaatttactggactgac
atatcactcaagaccatcagcagagcctttatgaatggcagtgcactggaacatgtggta
gaatttggcttagattatccagaaggcatggcagtagactggcttgggaagaacttgtac
tgggcagacacaggaacaaatcgaattgaggtatcaaagttggacgggcagcaccgacaa
gttttggtgtggaaagacctagatagtcccagagctcttgcattggaccccgctgaagga
tttatgtattggactgaatggggtggaaagcctaagatagacagagctgccatggatgga
agtgaacgtactacattagttccaaatgtggggcgagcaaatggcctaactattgattat
gctaaaaggaggctttattggacagacctggacaccaacttaatagaatcttcaaatatg
cttggactcaaccgtgaggttatagcagatgacttgcctcatccttttggcttaactcag
taccaagattacatctactggacggactggagccgacgcagcatcgagcgtgccaacaaa
accagtggccaaaaccgcaccatcattcagggccatttggattatgtgatggacatcctc
gtgtttcactcctctcggcaggcagggtggaatgagtgtgcttccagcaatgggcactgc
tcccacctctgcttggcagtgccagttggaggttttgtttgtggatgccctgcccactac
tctcttaatgctgacaacaggacttgtagtgctccaactactttcctgctcttcagtcaa
aagagcgccatcaaccgcatggtgattgatgaacagcagagccctgacatcatccttcct
atccacagccttcggaatgtccgggccattgactatgacccactggacaagcaactctat
tggattgactcacgacaaaacatgatccgaaaagcacaagaagatggcagccagggcttt
acagtggttgtgagctcagttccgaatcagaacctagaaatacagccctatgacctcagc
attgatatttatagccgctatatctattggacttgcgaggccaccaatgtcattaatgta
acaagattagatgggagatcgattggagtggtgttaaaaggcgagcaagacagacctcga
gccattgtggtaaacccagaaaaagggtatatgtattttaccaatcttcaggaaagatct
cccaaaattgaacgagctgctttagatggaacagaacgggaggtcctctttttcagtggc
ttaagtaaaccaattgctttagctcttgatagcagattgggcaaactcttttgggctgat
tcagatctccggcgaattgaaagcagtgatctctcaggtgccaaccggatagtattagaa
gactccaacattctgcagcctgtgggactgactgtgtttgaaaactggctgtattggatt
gataagcagcagcagatgattgaaaaaattgacatgacaggtcgagagggtagaaccaaa
gtccaggctcggattgcccagcttagtgacattcatgcagtaaaggggctgaatcttcag
gaatatagacagcacccttgtactcaggataatggtggctgttcacatatttgtcttgta
aagggagatggtactacaaggtgctcctgccccatgcacttggttctgcttcaagatgag
ctactatgtggagaacccccaacatgttctcctcagcagtttacttgtttcacgggagaa
attgactgtatccctgtggcttggcggtgcgatgggtttactgaatgtgaagatcacagt
gatgagctcaattgtcctgtgtgctcagagtcccagttccagtgtgccagtgggcagtgt
attgatggtgccctgagatgcaatggagatgccaactgccaggataagtcagatgagaag
aactgtgaagtgctttgtttaattgatcaattccgctgcaccaacggtcagtgcattgga
aaacacaagaaatgtgatcataatttagattgcagcgacaaatcagatgaactggattgt
tatccaactgaggagccagcaccacaggccaccaatacagttggttcagttattggagta
attgttaccatttttgtgtctggaaccatatactttatttgccagaggatgttgtgtcca
cgtatgaagggcgatggggaaaccatgactaatgactatgtagttcatggaccagcttct
gtgccccttggttatgtgccacacccaagctctttgtcaggatcccttccaggaatgtct
cgaggtaaatcaatgataagctccctcagtatcatggggggaagcagtggacccccttac
gaccgagctcatgtcacaggagcgtcgtcaagtagttcttcaagcaccaaaggcacttac
ttccctgcaattttgaaccctccgccatccccggccacagagcgatcacattacactatg
gaatttggttattcttcaaacagtccttccactcataggtcctacagctacaggccgcac
agttaccggcactttgcaccgcccaccacaccctgcagcacagatgtttgtgacagtgac
tacgctcccagccggagaataatgacctcagtggccacagccaagggctacactagtgac
ttgaactatgactcagagcctgtgcctccgcctcccacaccccgaagccagtacttgtcg
gcagaagagaactatgaaagctgcccaccttctccatacacagagaggagctactctcat
cacctctacccaccgccgccctctccctgtacagactcctcctga
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integrated database retrieval system
