KEGG   Phocoena sinus (vaquita): 116760275
Entry
116760275         CDS       T07759                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116760275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116760275
   03041 Spliceosome [BR:psiu03041]
    116760275
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     116760275
Spliceosome [BR:psiu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    116760275
SSDB
Motif
Pfam: THOC7 Sec8_N Anticodon_2 CENP-H OVT1
Other DBs
NCBI-GeneID: 116760275
NCBI-ProteinID: XP_032500793
Ensembl: ENSPSNG00000008012
LinkDB
Position
10:62504848..62506177
AA seq 204 aa
MGSVTDDEIIRKRLLIDGDGAGDDRRINLLVKSFIKWCYSGSQEEEYSQYQRMLITLSQC
EFSMRKTLLVYDMNLRETENYEKTYKEIECSIAEAREKIAECKRQILQAKRIRKNHQEYD
ALVKVIHHYPDRCETLKELEALRKELEHLSHIKESVEDTLELRKKQFYVLLTVLHELKQT
LENHEKPSKVEAAQETSMETDPKP
NT seq 615 nt   +upstreamnt  +downstreamnt
atggggtccgtgactgacgacgaaatcatacggaagcgtctcctaattgatggagatggc
gctggagatgatcggagaattaatctgctagtgaaaagtttcattaaatggtgctactct
ggatcccaggaagaggaatacagccagtaccaacgtatgctgatcacgctgtcccaatgt
gaattttcaatgcgcaaaaccttgctggtatatgatatgaatctcagagaaacggaaaat
tatgaaaaaacttacaaagaaatagaatgtagcattgctgaagcacgtgaaaaaattgct
gagtgcaaaaggcaaattcttcaagcaaaacgaatacgaaaaaatcaccaagaatatgat
gcattggtaaaagtgatccaccattatccagacaggtgtgagacattaaaggaactagag
gccctgcgtaaagaattagagcatctttcacatattaaagaaagtgttgaagatacgctg
gaattgagaaagaaacagttttacgttcttcttactgtcctccatgaacttaagcaaaca
ctggaaaatcatgaaaagccctcaaaggtagaagcagctcaagaaacaagcatggaaact
gatcctaaaccgtag

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