KEGG   Phocoena sinus (vaquita): 116760287
Entry
116760287         CDS       T07759                                 
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04145  Phagosome
psiu04210  Apoptosis
psiu04530  Tight junction
psiu04540  Gap junction
psiu04814  Motor proteins
psiu05010  Alzheimer disease
psiu05012  Parkinson disease
psiu05014  Amyotrophic lateral sclerosis
psiu05016  Huntington disease
psiu05020  Prion disease
psiu05022  Pathways of neurodegeneration - multiple diseases
psiu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116760287
  09143 Cell growth and death
   04210 Apoptosis
    116760287
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116760287
   04540 Gap junction
    116760287
  09142 Cell motility
   04814 Motor proteins
    116760287
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116760287
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    116760287
   05012 Parkinson disease
    116760287
   05014 Amyotrophic lateral sclerosis
    116760287
   05016 Huntington disease
    116760287
   05020 Prion disease
    116760287
   05022 Pathways of neurodegeneration - multiple diseases
    116760287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116760287
   03036 Chromosome and associated proteins [BR:psiu03036]
    116760287
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116760287
   04147 Exosome [BR:psiu04147]
    116760287
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116760287
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     116760287
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    116760287
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116760287
  Exosomal proteins of other body fluids (saliva and urine)
   116760287
  Exosomal proteins of colorectal cancer cells
   116760287
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 116760287
NCBI-ProteinID: XP_032500832
Ensembl: ENSPSNG00000011161
LinkDB
Position
10:64454380..64458276
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcctgatggccagatgccaagtgacaag
actattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaaa
catgtgcccagggcagtgtttgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggac
cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc
tttggcgggggaactggttccgggttcacctccctgctgatggaacgtctctctgtcgat
tatggcaagaagtccaagctggagttctccatttacccagcccctcaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaaccttgacattgag
cgcccaacctacacaaatcttaaccgccttattagccagattgtttcctccatcaccgct
tccctgcgatttgatggagccctgaatgttgatctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgcgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggcgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggagacctggccaaagtacagcgagctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggtgtggattctgtt
gaaggagagggagaggaagaaggagaggaatactaa

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