Phocoena sinus (vaquita): 116760295
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Entry
116760295 CDS
T07759
Symbol
RNASEL
Name
(RefSeq) 2-5A-dependent ribonuclease isoform X1
KO
K01165
ribonuclease L
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04621
NOD-like receptor signaling pathway
psiu05160
Hepatitis C
psiu05164
Influenza A
psiu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116760295 (RNASEL)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
116760295 (RNASEL)
05164 Influenza A
116760295 (RNASEL)
05168 Herpes simplex virus 1 infection
116760295 (RNASEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ribonuc_2-5A
Pkinase
Ank_KRIT1
PK_Tyr_Ser-Thr
Kdo
ANK_LRRK2
Kinase-like
TCAD9
APH
Motif
Other DBs
NCBI-GeneID:
116760295
NCBI-ProteinID:
XP_032500855
Ensembl:
ENSPSNG00000002703
LinkDB
All DBs
Position
1:complement(138422221..138438707)
Genome browser
AA seq
736 aa
AA seq
DB search
METKSPNNPQERPTPSTNGRVSEEDNHLLIKATKEDDIELVQQLLKKGADANFQDEEWGW
SPLHNAVQSGNEDIVDLLLNYGAEPCLRKRNGATPFIVAGITGNVKVLKLLFPKVADVNE
CDVHGFTAFMEASAYGRVEALRFLYKNGAKVNLHRKTKQDQEKIRKGGATALMDAAEEGH
VDVVRILLHEMGADVNARDNMGRNALTYALLNSDNEKVKAITRLLLDCKVDVSVRGEGKK
TPLILAVEKKNLGLVQMLLEQKHIEINDTDNEGKTALHLAVELKLKEIAQLLCHKGARTD
CGDLLAIARRNYDHDLAKFLRQHGAVEDFHPPAQDWKPQSSRWGEALKHLHRIYRPMIGK
LKIFIDEEYKIADTSEGGIYLGFYEDQEVAVKLFYEGSTHGQNEVSLLQSNRINSNVVTF
YGSENYKGSLYVCLALCEHTLEEHLADHRGEAVQNKEDEFARNVLSSLFKAVEELHLSGY
THQDLQPQNMLIDYKNGAYLADFDKSIKWTGDPQEIERDLEALGLLVLYVVNQGDISFES
LKDLRTEELIQLSPDEETSDLIHHLFSPGDNVKDLLSGLLGHPFFWSWASRYRTLRDVGN
ESDIKKRNAKGKILRLLQPGTSEVSTSFDQWTTKIDKFVMEKMNDFYTKCNKGVYRDTVG
DLLKFIRNLGEHINEAKNRQKKKSYFDESHSSFCVEKGHHKGLTVNSGHALQDEVNNWRT
FPVFSGEISRSGHVCL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagagccctaacaatcctcaggaaagacccacaccctctactaacgggagg
gtttcagaggaagacaaccatttgttgattaaagctactaaagaagatgacattgagctg
gtccagcaattgctaaaaaaaggggctgatgccaatttccaggatgaagaatggggctgg
tcacctttgcataatgcagtacaaagtggcaacgaggacattgtggatcttctgcttaac
tatggtgctgagccttgtctgcggaagaggaacggggccactcccttcatagttgctggc
atcactggaaacgtgaaggtgctcaaacttttatttccgaaagtagcagatgtcaatgag
tgcgacgttcatggcttcacagctttcatggaagcctctgcatatggtagagtcgaagcc
ttaagattcctgtataagaatggagcaaaggtgaatttgcatcgaaagacaaagcaggat
caagagaagattaggaaaggaggggccactgctctcatggatgctgctgaagaagggcat
gtagatgtcgtgaggatcctccttcacgagatgggggcagatgtcaatgcccgagacaat
atgggcagaaatgctttgacctatgctcttctgaactctgacaatgagaaggtgaaggcc
attactcgccttctgctggactgtaaggttgatgtcagtgtgaggggggaaggaaagaag
acgcccctgatcctggcagtggaaaagaagaacctgggtttggtacagatgcttctggaa
caaaaacatatagagatcaatgacacagacaatgagggcaaaacagcactgcatcttgct
gttgaactcaagctgaaggaaatcgcccagttgctgtgccacaaaggagccagaacagat
tgcggagaccttcttgccatagcaaggcgcaattatgatcatgaccttgcaaagtttctt
cgccagcatggagccgtagaagattttcaccctcctgctcaagactggaagccgcagagc
tcacgttggggggaagccctgaaacatctccacaggatataccgccctatgattggcaaa
cttaagatctttattgatgaagaatataaaattgctgacacttctgaagggggcatctac
ctggggttctatgaagaccaagaggtagctgtgaagctattctatgaaggcagcacacat
ggacaaaatgaagtctccttgttgcagagcaaccgaatcaacagtaatgtggtgacattc
tatggcagtgagaactacaagggctctctgtatgtgtgcctcgccctgtgtgaacacaca
ctggaggagcacttggccgaccacagaggggaggctgtgcaaaataaggaagatgagttt
gctcgaaatgtcctctcatctctatttaaggctgttgaggaactacacctgtctggatac
actcaccaggatctgcagccacaaaacatgttaatagattacaagaatggcgcttacctg
gcagatttcgataaaagcatcaagtggaccggagatccacaggaaatcgagagagatcta
gaggccctgggactgctggtcctgtacgtggtaaaccagggagacatttcttttgagagt
ctgaaggatctaagaactgaagagttgattcaactttctccagatgaggaaacttcggac
ctcattcatcacctgttctcccctggggacaatgtgaaggaccttctgagtggcctgctg
ggtcatcccttcttttggagttgggcgagccgctacaggacccttagggatgtgggaaat
gaatcagacatcaaaaagagaaatgctaaaggcaagatcctccggcttctgcaacctgga
acatctgaagtttccacaagttttgaccagtggacaactaagattgacaaatttgtgatg
gaaaaaatgaatgacttttatacaaaatgcaacaaaggtgtttatcgggacaccgtgggt
gacctgctgaagttcatccggaatttgggagagcacatcaatgaagcaaagaatcgacaa
aagaagaaaagttattttgatgaaagtcattcctccttctgtgtggaaaagggccatcac
aagggtcttacagtcaacagtggacatgccctgcaggatgaagtcaataattggagaacc
ttcccagtattttcaggagaaatttcccgatctggtcatgtatgtctatag
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