Phocoena sinus (vaquita): 116760342
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Entry
116760342 CDS
T07759
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B isoform X1
KO
K07888
Ras-related protein Rab-5B
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04014
Ras signaling pathway
psiu04137
Mitophagy - animal
psiu04144
Endocytosis
psiu04145
Phagosome
psiu04148
Efferocytosis
psiu04962
Vasopressin-regulated water reabsorption
psiu05132
Salmonella infection
psiu05146
Amoebiasis
psiu05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
116760342 (RAB5B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116760342 (RAB5B)
04145 Phagosome
116760342 (RAB5B)
04137 Mitophagy - animal
116760342 (RAB5B)
04148 Efferocytosis
116760342 (RAB5B)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
116760342 (RAB5B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116760342 (RAB5B)
05152 Tuberculosis
116760342 (RAB5B)
09174 Infectious disease: parasitic
05146 Amoebiasis
116760342 (RAB5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116760342 (RAB5B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116760342 (RAB5B)
04031 GTP-binding proteins [BR:
psiu04031
]
116760342 (RAB5B)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
116760342 (RAB5B)
Endosome - Lysosome transport
116760342 (RAB5B)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116760342 (RAB5B)
Exosomal proteins of other body fluids (saliva and urine)
116760342 (RAB5B)
Exosomal proteins of colorectal cancer cells
116760342 (RAB5B)
Exosomal proteins of melanoma cells
116760342 (RAB5B)
GTP-binding proteins [BR:
psiu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
116760342 (RAB5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
116760342
NCBI-ProteinID:
XP_032501012
Ensembl:
ENSPSNG00000010918
UniProt:
A0A8C9C141
LinkDB
All DBs
Position
10:complement(59559726..59577348)
Genome browser
AA seq
264 aa
AA seq
DB search
MGALRRGPGGLGARSWTVEAWKSPPLPPPPSAALWHPPPSTLSHSDNLAMTSRSTARPNG
QPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKF
EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALA
GNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGG
AAGRSRGVDLHEQSQQNKSQCCSN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctgaggagggggccgggcgggctgggagcccgaagttggactgttgaagcc
tggaagtcccctcccctcccccctcccccctctgccgctctgtggcatccccctccctct
accctttcccattctgataatctagccatgactagcagaagcacagccaggcccaatggg
cagccccaggccagcaaaatatgccagttcaaattggtcctgctgggtgaatctgcagtg
gggaagtctagcctggtattacgttttgtcaaagggcagttccacgagtaccaggagagc
accattggagcggccttcctcacccagtctgtttgtctagatgacacaacagtcaaattt
gagatctgggacacagctgggcaggagcgataccatagcttggcccccatgtactacaga
ggtgcccaagctgcaattgtggtttatgacattactaatcaggaaaccttcgcccgagca
aagacatgggtaaaggaactacagcgacaggccagtcctagcatcgttattgccctggcg
gggaacaaagctgacctggccaacaagcgcatggtggagtacgaagaggcccaggcgtat
gcagatgacaacagcttattgtttatggagacttcagccaagacagctatgaacgtgaac
gatctcttcctggcaatagctaagaagttgccaaagagtgaaccccagaatctggggggt
gcagcaggccgaagccggggtgtggatctccatgagcagtcccagcagaacaagagccag
tgttgtagcaactga
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integrated database retrieval system
