Phocoena sinus (vaquita): 116760385
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Entry
116760385 CDS
T07759
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116760385
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116760385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116760385
03041 Spliceosome [BR:
psiu03041
]
116760385
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116760385
mRNA cycle factors
Common to processing body (P body) and stress granule
116760385
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
hnRNP proteins
116760385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
116760385
NCBI-ProteinID:
XP_032501112
Ensembl:
ENSPSNG00000004346
LinkDB
All DBs
Position
1:107720363..107721548
Genome browser
AA seq
275 aa
AA seq
DB search
MRDPNTKRSRGFRFVTYATVEEVDVVMNARPHKVDGSVVEPKRAISREDSQRPGVHLTVK
KIFVGGNKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSVIKRGFAFVTFDDHDSVDKIVIQ
KYHNENSHNCEVRKALSKQEMASASSSQRSRSGSGNFGGGRGGGFGGNDNFGHGGNFSGQ
GGFGGSRGGGGYGGSGDDYNGFGNDGSNFGGSGSYNDFGSYNNQSSNFGPMKGGNFGGRS
SSPCGGGGQYFAKPRNQGGYCGSSSSSSYGSGRRF
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagggatccaaacaccaaacgttccagaggcttcaggtttgtcacatatgccactgtg
gaggaggtggatgtggtcatgaatgcaaggccacacaaggtggatggaagtgttgtggaa
ccaaagagggccatctcaagagaagattctcaaagacctggtgtccacttaactgtgaaa
aagatttttgttggtggcaataaagaagacactgaagaacatcatctaagagattatttt
gaacagtatgggaaaattgaagttattgaaatcatgactgatcgaggcagtgtcataaag
agaggctttgctttcgtaacctttgatgaccatgactctgtagacaagattgtcattcag
aaataccataatgagaacagccacaactgtgaagtaaggaaagccctatctaagcaagag
atggctagtgcctcatccagccaaagaagtcgaagtggttctggaaactttggtggtggt
cgtggaggtggttttggtgggaatgacaactttggtcatggaggaaacttcagtggtcaa
ggtggttttggtggcagccgtggtggtggtggatatggtggcagtggggatgactataat
ggatttggtaatgatggaagtaattttggaggtagtggaagctacaatgattttggcagt
tacaacaatcaatcttcaaattttggacccatgaaaggaggaaactttggaggcagaagt
tctagcccctgtggtggtggaggccaatactttgccaaaccccgaaaccaaggtggctat
tgtggttccagcagcagcagtagctatggaagtggtagaaggttttga
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