Phocoena sinus (vaquita): 116760478
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Entry
116760478 CDS
T07759
Symbol
PKDREJ
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease and receptor for egg jelly-related protein
KO
K19921
polycystic kidney disease and receptor for egg jelly-related protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116760478 (PKDREJ)
Membrane trafficking [BR:
psiu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116760478 (PKDREJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
REJ
PKD_channel
Polycystin_dom
PLAT
Ion_trans
Zn_ribbon_InsA
DUP
DUF7274
CUB_M02D8_5_5th
Motif
Other DBs
NCBI-GeneID:
116760478
NCBI-ProteinID:
XP_032501261
LinkDB
All DBs
Position
10:3641264..3649098
Genome browser
AA seq
2312 aa
AA seq
DB search
MRPGPVLLLLGLGLGLSLSGGPGRRPPTPAPRGASATVPRVPGSPSGDLLGREPASARRA
PPEARVRIPARTRAAVLRSVRGARGLGVRGVGVGVGHARLSLRPRAAPGGGVILSGGRDL
CLRTGRLTGPAPRCLRAHVLLRARRAAAAAAAPARVDLQLSAPGGRLSLRWLARLPRSLG
RLEWTFRLGLLGPTVPTAAAAAARVSPRSAVSPLSALPRGPRSYAGLVARTKCPTDGPTP
VVLEAVNPNSSQAMESSVSCQISRSGVCVLDLVRIERNDDSPLQLTRKMEVTINATVKVH
CPIQRFFGQYWKLYSVASVSDKPDWTKPLQNPPFKSENTPSSIRISTHSLSWGVYLLNFS
VYIVTHDPKIPLKKDSDSIYIIIVKSPLQAVIPGDTNITVNFTDGLTLNGNMSSDPDAEN
PLEGLQFFWYCTTDPRNYDGHEITVRSKEVCLPEQVDLRWTWASGPILTLSPETLHGGRV
YFFRLVIQKNDRTAFSDRVVHVLQGPAPVASISCIENCDTVLIISERFSLSLECPRCKAG
RDVYRWSILSSSGDKMPFDWTGHTTTGRNGAYLSVKAFAFRRFVEDKFWISLNLATWGGS
SLVLRHPFVIHHVPETTECKIDPAEGIAFITKFVVHCCSFKDKNIVLTYKIIVPDVRGFG
EISSLKENNFGSILYWGKDCTAPPSFLPVGVLANHYALKIQAQAYNTSLRAFSQVTLYAT
VQAPTDINSSRTVLQELFNSTVGPDSSLSTLLQQQDFLPAGYLMYIVASVLNSMKTDSHL
QADQIRLREHLFNQSFILPVNTVVEISQVVMTVTKLTQKTSEFSSLAQKLATVRTWQASQ
ALQECHRRDKHISSEQIETVSTGILTSLSNILKLMVRHEVVEEPFHVVESLAETVLAVKV
PEDTTTAMRTSNFNMYIKKTEKWNVTKFFSTEKHCRNCFYPTLNVSSVPSLPANAPISTM
FCEFADDPFPWLNYGENILTEVVGFRMTGTEATGDVIEITPDVVEVYLVRKNLSFGTFNL
TVGPSKESPKANESLRKTTGAFSFNVDSRAGKEVLIHIVTEVAMLFTVLVYAGHQITPTA
LIATYLVPHRIPPVAQDSDLFDPDCTVTEARVVCLPPSLLRVIAQRTSSSEPTVAVVLQA
PHFVLEPNDKLVRISVFSTQCLDMYGIQSDWREDTCVVGEKTTWRKVHCICKNPGRARRQ
LDAMKLASLHLRTHYLAAKVIVVPNPVDLRLEVIRNVTQNPVTLFTVLFIMLLYIVLGFW
ALHRDEMDKCLRERVVVLPDNDPYDKVCYLVTVFTGSRCGSGTRANVFVQLQGTESSSDV
HCLSHPQFTTLYRGSISTFLLTTKNDLGDIHSIRVWHNNEGSSPSWYLSRIKVENLFSRH
IWLFMCREWLSIDTSLDRTFQVTPPDKSLNRMDFFLTDLSYRLGRSHMWFSVFSGVIATP
FSRLQRLSCCLAMLLSSLLCNIMFFNLNKEKEAESQEEKYLRSMVIGMESVLITIPVQLM
ITSLFIYSQRRPPVTLREVAPRKHPGTPAASEHWEKRLAKWHAQETGNERSREPEKLPPT
RRSPGLPKASVKTTSKRRPQPKRAESKVSRTQRKNKNANNPNVEDNRSVSPGEHPRQPDA
TPLKEKTRIVLPRCCVYVAWLLVFVTCTISSFFIVFYGLTYGYKKSIEWLFASFCCFCRS
VLLVQPSKIIVVSGYRTSKPKVLXNLLWVGSCRYSEIELQNITQNPEEMRRRRQHIVQLR
SSRMYQPPTEDDITIFKRKKRIKRRAFLFLSYILTHFVFLALLLSLVTLLHHTDGFYYNR
FIRDQFSVDLASVTKPEDIYRWLNSVLLPLLHNDLRPTFLPESSSKILGLPLMRQVRARP
GEKTCLPAKHFTQDSLKREIHCHPEYGTDPEDTKSYSGLWNRVSKRAIDKTTKGFTYKPR
EKRWVYHSYGLLHTYGSGGYAFYFFPEEQQFNSTLRLSELQGSRWLDEKTWAVILELTTF
NPDTALFCSVSVIFEVSRVGVVNASLSAHSFSLADLNRKTSAEIYLYVAILIFFFAYVVE
EVYVITQERSAYVKSVYNLLNFALKCIFTVLIVLFFRKHFLAVGIIRFYLSNSEDFIPFH
AVSQVDHAMRVILGFLLFLTNLKTLRYSRFFYHVRLAQRAIQTALPGICHMALVVSVYFF
VYMTFGYLVFGQHEWNYSDMIHATQTVFSYCVSALQNTEFSSNRVLGVLFLSSFLLVMMC
IWINLLQAVILSAYGEMKQPVYEEPSEEAEAMTYLCHRLRTAFGFLSFKSKAEDQPKFFV
NMVYGQPEKNDSRYLGLKTRNINGKKTVYLVV
NT seq
6939 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgggacccgtgctcctcctcctgggcctgggcctgggcctgagcctgagcggt
ggccctggccgccgcccgccgaccccggctcctcgcggggccagcgccaccgtccccagg
gtgcccggctcgccgtccggcgacctcctcggccgggagcccgcctcggcccgccgcgcc
ccgcccgaggcccgggtccgcatcccggcgcggacccgggcggccgtgctgcgctcggtc
aggggcgcccggggcctcggggtgcgcggcgtcggcgttggcgtcggccacgcccgcctc
agcctacggccccgcgcggccccgggcggcggcgtcatcctgagcggcggccgcgacctc
tgtctgcggaccgggcggctcacaggcccggcgccgcgctgcctccgcgcgcacgtcctg
ctgcgcgcccgccgcgccgccgccgccgccgccgcgcccgcccgcgtggacctgcagctg
tcggcgcccggcggccggctctccctgcgctggctcgcccgcttgccgcgctccctcggg
cgtctggagtggaccttccgcctcgggctgctcgggcccacggtccccacggccgccgct
gccgccgcccgcgtgtcgccccgctcggcggtgtcgcccctttcggctctgccccgcggc
ccacgctcctacgcgggcttagtggccagaaccaagtgtcccacggacggtcccacgcct
gtcgtcttagaggctgtcaacccgaacagctcccaagccatggagtcctcggtgtcctgt
cagatatcacgctcgggggtctgtgtgttggatctggtgaggatcgaaaggaatgacgat
tctcccctgcagctgacccggaagatggaagtcaccatcaatgccacggttaaggtccac
tgcccaatccagaggttctttggtcagtattggaaactctattccgtggcctctgtatct
gacaagccggactggactaaacctttgcaaaatccacctttcaagtcagagaacactcca
tcaagtatacgtatctccacgcattctttatcttggggggtgtatctgcttaatttctcc
gtgtacatcgtcacacatgatccaaagatacctctgaagaaagactcagattccatctat
atcatcattgttaaaagtcccctgcaggcggttattcctggggataccaacatcacagtt
aatttcacagatgggctgactctgaatggaaatatgtcctctgatccagatgcagaaaac
cctttagagggacttcaatttttttggtactgtaccacagacccaagaaactacgatgga
catgaaattacagtgaggagcaaggaagtctgtctcccagagcaggttgatctcaggtgg
acatgggcctctggtcctatactcacactttcgccggaaacacttcacggcggccgtgtg
tattttttccgactggtgatccagaagaacgacagaacagcgttttctgatagggtggtg
catgtgctccaaggaccggcacctgtagcaagcatttcatgtattgaaaattgtgataca
gttttgattatatcagagagattttctttgtctctagaatgcccacgttgtaaagcaggc
cgtgatgtctatcgatggtccattctgtcgtcttcaggtgataagatgccatttgattgg
acggggcacacaacaacagggcggaatggtgcatatttgtctgtaaaagctttcgccttt
cggcgtttcgttgaagataagttttggatttctctaaatctagcaacctggggtggatcg
agcttggtcttaaggcatcccttcgttattcaccacgtccctgaaaccacagaatgcaaa
attgatccagctgaaggaattgcattcattactaaatttgttgtccattgttgtagtttc
aaggataagaacatcgttcttacatataaaataatagttcctgatgtgcgtggttttggt
gaaatcagttctttaaaagagaataactttgggtccatcctctattgggggaaggattgc
acagcgcccccttcctttctccctgttggtgtgttagccaatcattacgccttgaaaata
caagctcaggcatataatacctctctgagagctttttctcaggtgactttgtacgccact
gtacaggctcccactgacataaactcatcaaggactgtgttgcaggagttattcaattcc
actgtgggaccagattcatcactgtctactttgcttcaacagcaggattttttacctgca
ggttatttaatgtatattgtagcttctgtcttgaatagcatgaaaaccgactcacatctg
caagctgaccaaattagactccgagaacaccttttcaatcagtctttcattcttcctgta
aacactgtggtggaaattagccaggtggtcatgactgttactaaattaacgcagaaaacc
tctgagttctcctcgcttgctcagaaactggccacggtgaggacttggcaagcaagccaa
gccctccaagagtgtcaccggagagataagcacatttcttctgagcaaatagaaactgtg
agcactggaatattaacaagtttgtctaatatcctgaaactgatggttcgtcatgaagtg
gtcgaagagcctttccatgtcgttgaatctctagcagagacagtactggctgtaaaagtg
ccagaggatacgaccactgcaatgaggacgtccaactttaacatgtatatcaagaaaacg
gaaaagtggaatgttaccaagtttttcagcactgagaaacactgtcgaaattgtttttat
ccaaccctaaacgtgagcagcgttcctagtctgcctgccaacgctccaatctctacaatg
ttttgtgagtttgcagatgaccctttcccttggctaaattatggggaaaacattttgacc
gaggtggttggattccgaatgacaggaaccgaggccaccggtgacgtgattgagatcaca
cctgatgtagtggaagtgtacctcgtcagaaaaaacttgagctttgggacttttaatctc
acggtgggccccagcaaggagtctcctaaagcgaatgagtcattgagaaagacgacgggg
gcatttagctttaacgtggacagcagagcagggaaggaggtgttgatccacattgtgacg
gaagtggccatgttgttcacggtgttggtgtatgctggccatcagatcacacccaccgct
ttgatcgccacctacctcgtgccccatcgcatccccccagttgcccaagacagtgacctg
tttgaccctgactgtacagtgacagaggcccgtgtggtttgccttcccccatccctgttg
cgggtcatagctcagcgaaccagctcctctgagcctaccgtcgctgtggttctgcaggca
cctcattttgtcctagagcccaatgacaagttagtgagaatttctgttttcagcactcaa
tgcttggacatgtatgggatccagagcgattggagagaagacacctgcgttgtcggagag
aagaccacctggcggaaagtgcattgtatctgcaagaacccagggcgggccaggcggcag
ctggacgcaatgaaactagccagccttcacctgcgtacccactatttggcggccaaggtg
atcgtggtccctaaccccgtggatctacgattagaggtcatcaggaacgtgacccaaaac
cccgtgaccctcttcactgtacttttcattatgctcttgtacatagtcctagggttctgg
gccttgcacagagatgaaatggacaagtgtcttagggagcgtgtggtagttctccctgat
aacgatccttatgataaggtatgttacctagtcaccgtttttacaggaagccgttgtggg
tctgggaccagggccaatgtctttgtccaactgcagggaacagagagtagcagcgacgtg
cactgtttaagccatccacagtttacaaccctctaccgaggaagcatcagcactttcctc
ctaacgacgaaaaatgacttgggggacatccattccatccgcgtgtggcacaacaacgag
ggcagttcccctagttggtatttaagtagaatcaaagtggagaatctgttcagcagacac
atctggctgttcatgtgccgggagtggctttctattgacacctctttggacagaaccttt
caagtaacgcccccagataagtctctcaacagaatggattttttccttacggatttaagt
tataggctggggagaagccacatgtggttctctgttttttctggtgtcatcgccaccccg
ttcagtaggctccagagactgtcctgttgcttagccatgttgctgtcctcccttctgtgt
aatattatgttctttaatctgaataaagaaaaagaagcggagtcacaagaggagaagtac
ctcaggtcgatggtgatcgggatggaaagtgtcttaattaccatccccgtgcaactaatg
atcacgtctttgttcatctattcccagaggagacctccggtgaccctaagggaggtcgct
cctcggaagcatccggggacgccagcagcaagtgaacactgggaaaaacgattagcaaag
tggcacgctcaggaaactggcaacgaacgctcccgggagcctgaaaagcttccacctact
aggagaagtcctggacttcccaaggcttctgtcaagaccacctctaaaagacggccccag
cccaagcgagcagaaagcaaggtctcccgcacccaaagaaaaaataaaaacgccaataac
ccaaacgttgaagacaatcgaagtgtttctcctggagagcaccctcgccagcccgatgct
acacccctcaaagagaagaccaggattgttctgccgcggtgttgcgtttatgtcgcatgg
ctcttggtttttgtcacttgtaccatatcctcattctttattgtattttacggactgact
tacggctacaaaaagtcaatagaatggctgtttgcatcattttgttgcttctgcaggtca
gttttgctggtgcaaccatctaaaattatagtcgtgtcaggctacagaacaagtaagccc
aaagtattgtaaaaccttctgtgggtcggcagctgtcgctacagtgagatcgagctgcag
aacatcacgcagaacccagaggaaatgcgcaggcgccggcagcacatcgtccagctccga
agctcgaggatgtaccagcccccgactgaagacgatatcacgatattcaagagaaagaag
aggatcaagagaagagctttcctgttcctgagctacatcctcactcacttcgtgtttctg
gccctcctgttgagcctggtcaccctcctacaccacaccgacggcttttactataatcgg
tttattcgggaccagttctctgtggatctggcgtcggtgaccaagccggaagacatctat
cggtggctgaacagcgtgctgttgcctctgctccacaacgacctgcgtcccacctttctc
cctgaaagctcctctaaaatcctcggcctgcccctgatgcggcaggtgagggcgcgacct
ggagagaaaacctgtctgcctgccaaacacttcacgcaggacagcctcaaaagagagatt
cactgtcaccccgaatacggcactgacccagaggacacaaaaagctactccgggttgtgg
aatagagttagtaagcgggctatagacaagactacgaaaggatttacttacaagcctcga
gaaaagagatgggtgtaccattcctatgggctgttgcatacctacgggtcaggagggtac
gcgttctatttttttccggaagagcagcagtttaattccacactgaggctcagcgaactc
cagggaagccgttggctggatgagaagacatgggctgtgatcttggaactaacaactttt
aatccagacaccgccctcttctgcagcgtctcagtcatctttgaggtctctcgggtagga
gtcgtgaacgctagcctgtctgcgcactccttctcgcttgccgatctcaacagaaaaact
tccgcagaaatctacttgtacgtggccatcctcatttttttttttgcctacgttgtcgag
gaggtctacgtcatcacacaagaaaggtccgcctacgtgaaaagcgtatataatttgctc
aactttgctttaaaatgcatctttaccgtgttgatcgtgctctttttcaggaaacacttc
ttggctgtcggtataattcggttttacctgtcgaactctgaggatttcattccctttcat
gcagtgtctcaagtagatcacgccatgagggtgattttgggtttcctgttgtttctgaca
aacctgaagaccctcaggtattccaggttcttctaccatgtgcgtctcgcacagagggcc
atccagactgcccttcccggcatctgccacatggcactagtggtgtccgtgtacttcttc
gtctacatgactttcggttacctggtattcgggcagcacgaatggaactacagtgatatg
attcacgccacgcagacagtattctcctactgcgtttcagctcttcagaacacggaattt
tccagtaaccgggttctcggggtcctgtttctctcatcttttctgctggtgatgatgtgc
atatggatcaacttgcttcaggcggtgattttgtctgcctacggggaaatgaagcagccc
gtgtatgaggagccctcagaagaagcggaagcaatgacctacctgtgtcacagactaaga
actgcatttggctttctgtccttcaaatccaaggcagaagaccaacccaagttctttgtc
aacatggtgtacgggcagccagagaagaatgacagccggtacctggggctgaagaccaga
aacatcaatgggaagaaaacggtgtatctcgttgtgtga
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integrated database retrieval system
