Phocoena sinus (vaquita): 116760533
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Entry
116760533 CDS
T07759
Symbol
SLC6A17
Name
(RefSeq) sodium-dependent neutral amino acid transporter SLC6A17 isoform X1
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116760533 (SLC6A17)
Transporters [BR:
psiu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116760533 (SLC6A17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Gate
Tmemb_18A
Motif
Other DBs
NCBI-GeneID:
116760533
NCBI-ProteinID:
XP_032501384
Ensembl:
ENSPSNG00000014052
LinkDB
All DBs
Position
1:98109887..98159750
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AA seq
723 aa
AA seq
DB search
MPKNSKVTQREHSSEHVTESVADLLALEEPVDYKQSILNVAGEAAGKQKVADVEDRPAWN
SKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQRI
RRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSIFYFFKSFQYPLPWSECPVA
RNGTAAVVEPECEKSSATTYFWYREALDISNSISESGGLNWKMTLCLLVAWSIVGMAVVK
GIQSSGKVMYFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQ
VFFALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLGFKANIMNE
KCVVENAEKILGYLNTDVLSRALIPPHVNFSHLTTKDYAEMYKVIKTVKEDHFSALGLDP
CLLEDELDKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMIGTMAGITTP
IIDTFKVPKEMFTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSATLPLTVIVILENVAVA
WIYGTKKFMQELTEMLGFQPYRFYFYMWKFVSPLCMAVLTTASIIQLGVTPPGYSAWIKE
EAAERYLYFPNWAMALLITLIVVAVLPIPVVFVLRHFHLLSDGSNTLSVSYKKGRMMKDI
SNLEENDETRFILSKVPSEAPSPMPTHRSYLGPGSTSPLETSGNPNGRYGSGYLLASTPE
SEL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaacagcaaggtgacccagcgcgagcacagtagtgagcatgtcacggagtcg
gtggccgacctgctggcccttgaggagcctgtggactataaacagagcatcctgaatgtg
gccggagaagcagccggcaagcagaaggtggcggatgtggaggaccggccggcctggaac
agcaagctgcagtacatcttggcccagatcggcttctctgtgggccttggcaacatctgg
aggttcccctacctgtgccagaaaaatggaggaggtgcctacctggtgccctacctggtg
ctgctgatcatcattgggatcccgctcttcttcctggagctggctgtgggccagaggatc
cgccgcggcagcatcggcgtgtggcactatgtgtgtccccgcctgggcggcatcggcttc
tccagctgcatagtctgcctcttcgttgggctgtactataatgtgatcatcgggtggagc
atcttctatttcttcaagtctttccagtacccgctgccctggagtgagtgccctgtcgcc
aggaatgggaccgcggcagtggtggagccagagtgtgagaagagctcggccactacctac
ttctggtaccgagaggcattggacatctccaactccatctcagagagcgggggcctcaac
tggaagatgaccctgtgcctcctcgtggcctggagcatcgtgggcatggccgtcgtcaag
ggcatccagtcctcggggaaggtgatgtatttcagctccctctttccctacgtggtgctg
gcctgcttcctggtccgggggctgctgctgcggggggccgtcgatggcatcctgcacatg
ttcactcccaagctggacaagatgctggacccccaggtgtggcgggaggcagccacacag
gtcttcttcgccctggggctaggctttgggggtgtcatcgccttctccagctacaacaaa
caggacaacaactgccacttcgacgccgccctggtgtccttcatcaacttcttcacctcg
gtgctggccaccctcgtggtgttcgctgtgctgggcttcaaggccaacatcatgaacgag
aagtgtgtggtcgagaatgccgagaagatcctggggtacctcaacaccgacgtcctgagc
cgggccctcatccctcctcacgtcaacttctctcacctgaccactaaggactacgcggag
atgtacaaggtcatcaagaccgtgaaggaggaccatttctcagccctgggcctcgatccc
tgccttctggaggatgagctggacaagtccgtgcagggcacaggcctggccttcatcgcc
ttcaccgaggccatgacgcacttccccgcctccccgttctggtccgtcatgttcttcctg
atgcttatcaacctgggcctgggcagtatgatcgggaccatggcaggcatcaccacgccc
atcatcgacaccttcaaggtgcccaaggagatgttcacagtgggctgctgtgtctttgcc
ttcttcgtggggctgttgttcgtccagcgctccggaaactactttgtcaccatgtttgat
gactactcggccaccctgccgctcaccgtcatcgtcatccttgagaacgtcgctgtggcc
tggatctatggaaccaagaagttcatgcaggagctgacggagatgctgggcttccagccc
taccgcttctatttctacatgtggaagttcgtgtctccactgtgcatggctgtgctcacc
acggccagcatcatccaactgggggtcacgcccccgggctacagcgcctggatcaaggag
gaggctgccgagcgctacctgtatttccctaactgggccatggctctcctgatcacgctc
atcgtcgtggctgtcctgcccatccctgtggtgttcgttctgcggcacttccacctgctc
tccgacggctccaacaccctctccgtgtcctacaagaagggccgcatgatgaaggacatc
tccaacctggaggagaacgacgagacccgcttcatcctcagcaaggtgcccagcgaggcg
ccctcccccatgcccactcaccgctcctacctggggcccggcagcacatcgcccctggag
accagtggcaaccccaatggacgctatgggagtggctacctcctggccagcacccctgag
tcggagctgtga
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