Phocoena sinus (vaquita): 116760584
Help
Entry
116760584 CDS
T07759
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00310
Lysine degradation
psiu00514
Other types of O-glycan biosynthesis
psiu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116760584 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116760584 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116760584 (COLGALT2)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116760584 (COLGALT2)
Glycosyltransferases [BR:
psiu01003
]
O-Glycan biosynthesis
O-linked Gal type
116760584 (COLGALT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
116760584
NCBI-ProteinID:
XP_032501521
Ensembl:
ENSPSNG00000003445
UniProt:
A0A8C9BJM3
LinkDB
All DBs
Position
1:complement(139691593..139833345)
Genome browser
AA seq
626 aa
AA seq
DB search
MAASPAAALAWALLLLSWALLRGGCRARFAAEPDSEDDEGEAVVFSESPLQRPTVMVAVL
ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEILREWLKNVQRAYHYVEWRP
MDEPESYPDEIGPKHWPGSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNL
LIAENKTVVAPMLESRGLYSNFWCGITPQGFYKRTPDYLQIREWKRLGCFPVPMVHSTFL
IDLRKEASDKLMFYPPHQDYTWTFDDIIVFAFSSRQAGIQMHLCNREHYGYLPIPLKSHQ
TLQEDIENLIHVQIEAMIDHPPMEPSQFVSVVPKYPDKMGFNEIFMINLKRRKDRRDRML
RTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV
WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDDIDRVQLDWELIYIGRKRMQLKEPEK
AVPNVVNLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPIMYNKHPVAEYME
HYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQGH
IYRNAKNTEALPPPTSLDTVPSRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaagccccgctgccgccctggcctgggcgctgctactcctctcgtgggctctg
ctccgcggcggctgccgggcgcgcttcgctgccgagccggactccgaagacgacgaaggg
gaggcggtagtattctccgagtcccccctgcagagacccacggtgatggtggccgtcctc
gcgcgtaacgctgcgcacacgctgcctcacttcctcggctgcctggagcggctggactac
cccaagagcaggatggccatctgggcagccactgatcacaatgtggataatacaacagaa
atactcagggagtggttgaaaaatgtccagagagcctatcactatgtggagtggaggcct
atggatgaacctgagtcttatcctgatgaaatcggaccaaagcactggcctggctcccgt
tttgcccatgtgatgaaactacgacaggcagcccttcgaactgcgagggaaaaatggtca
gactacattctgttcatagatgttgacaacttcctgactaatccacagaccctcaatcta
ctgattgcagaaaacaaaaccgttgtggcccccatgctggagtctcggggcctgtactct
aatttctggtgcggaatcacacctcagggcttctataaacggaccccagactatcttcag
attagagaatggaagaggttgggctgttttccggtccccatggtccactccacattccta
attgacctcaggaaggaagcctctgacaagctgatgttctacccccctcaccaggactac
acctggacctttgatgacatcatcgtctttgccttctccagcaggcaagcaggcatccag
atgcacctctgcaacagagagcactacggctacctgcccatccccctgaagtcccatcag
accctacaggaggacattgagaacctcatccatgtgcagatagaagcaatgattgaccat
cctccaatggaaccttcccagttcgtctcagttgtccctaaatatccagacaagatggga
ttcaatgagattttcatgataaacctgaagcgtagaaaggacaggcgggaccggatgtta
cgtaccctgtacgagcaggagattgaagtcaagattgtcgaggctgtggatggaaaggca
ctcaacacaagccagctgaaggccctgaatattgaaatgctgccaggatatcgagatccc
tactcctccaggcctctaactaggggtgaaattggctgcttccttagccactactctgtc
tggaaagaggtaattgaccgagagctggagaagactcttgttattgaggatgatgtgcgt
tttgaacatcagtttaagaagaagctcatgaagctgatggatgatattgatcgagtccag
ctggattgggaactgatttatattggcaggaagaggatgcaactaaaagagccagagaaa
gctgtgcccaatgtggtaaatctggtcgaagctgactattcttactggactctgggctat
gttatctctctggaaggagcacagaagcttgttggagccaatccttttgggaagatgcta
ccagtggatgagtttctgccaatcatgtacaacaagcatcctgttgctgagtacatggag
cattacgaatccagggacttgaaagccttctctgcagaacccttgctcatctacccaaca
cactacacaggccagccagggtatctgagtgacacggagacctcaaccatctgggacaat
gagacagtggccactgactgggacaggacacatgcctggaagtccaggaagcaaggtcac
atctaccgcaatgccaagaacacagaggccctgccaccgccaacctccctggacactgtg
ccttcgagagatgagttatga
DBGET
integrated database retrieval system
