Phocoena sinus (vaquita): 116760662
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Entry
116760662 CDS
T07759
Symbol
HAL
Name
(RefSeq) LOW QUALITY PROTEIN: histidine ammonia-lyase
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00340
Histidine metabolism
psiu01100
Metabolic pathways
psiu04382
Cornified envelope formation
Module
psiu_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
116760662 (HAL)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116760662 (HAL)
Enzymes [BR:
psiu01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
116760662 (HAL)
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Motif
Pfam:
Lyase_aromatic
Par3_HAL_N_term
NFACT-C
Motif
Other DBs
NCBI-GeneID:
116760662
NCBI-ProteinID:
XP_032501755
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Position
10:25335215..25359876
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AA seq
662 aa
AA seq
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MPRYTVHVRGEWLAVPCQDAQLTVGWLGREAVRRYIKNKPDNGGFASVDNVSFLVRRCKG
LGLLDHEDPLEVALEDNEFVEVVIEGDAMSSDFIPSQPEGVYLYSKYREPEKYIALDGDS
LTTEDLVNLGKGHYKIKLTPTAEKKVQNSREVIESIVKEKLVSFSLFVYGITTGFGKFAE
TVIPVSKLEELQVNLVRSHSSGVGKPLIPERCRMLLALRINVLAKGYSGIPWRTLKQVIE
VFNASCLPYVPEKGTVGASGDLAPLSHLALGLIGEGKMWSPKSGWADAKYVLAAHGLKPI
VLKPKEGLALINGTQMITSLGCEAVERASAIARQADIVASLTLEVLKGTTKAFDTDIHAV
RPHRGQVEVAFRFRSLLDSDHHPSEIAESHRFCDRVQDAYTLRCCPQIHGVVNDTIAFVK
NIITTEINSATDNPMVFASRGETVSGGNFHGEYPAKALDYLAIGVHELAAISERRIERLC
NPSLSELPAFLVAEGGLNSGFMIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMG
GWAARKALRVIEHVEQVLAIELLAACQGIEFLRPLKTTTPLEKVYDLVRSVVRPWIKDRF
MAPDIEAAHRLLIEQKVWEVAAPYIEKYRMEHVPESRPVSPTAFSLEFLHKKSTKIPESE
DV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggtatacggtgcacgtgcgcggagagtggctggcggtgccctgccaggatgcg
cagctcacggtgggctggctgggccgggaggccgtgcggaggtacatcaagaacaagcca
gacaatggtggcttcgcctcggtggacaatgtgagcttcctcgtgcgccgctgcaagggc
ctgggcctgctggaccacgaggacccgctggaggtggccctggaggacaacgagttcgtg
gaagtggttatagaaggggatgccatgtcttccgacttcattccatcgcaaccagaagga
gtttacctatacagcaaataccgggaacccgaaaagtacattgccttagatggggacagc
ctgaccacagaggatctggtcaacttgggcaagggacactacaaaatcaagctcaccccc
actgctgaaaagaaggtgcaaaactccagggaagtcatagaaagcatcgtgaaagaaaaa
ctggtatccttttctctttttgtttacggcattactacaggttttgggaaatttgcagaa
actgtaattcctgtcagtaaactagaggagctccaggtcaacctagtacgttcacattct
tcaggtgttgggaagccactaatccctgagagatgtcggatgctcttggctttaaggatc
aatgtcttagccaaaggatacagtggcattccctggaggactctcaaacaagttatcgaa
gtatttaatgcctcctgcctgccctatgttccagagaaaggaactgttggtgccagtgga
gacctggccccactctctcatcttgctctcgggctaattggggaagggaagatgtggtct
ccgaagagtggctgggctgacgctaaatacgtcctggcagctcacggattgaaaccaatt
gttttgaagccaaaagagggtctggcgctcatcaacgggacgcagatgatcacctccctg
ggctgtgaagctgtggagagagccagtgccattgctcggcaggctgacatagtggcgtcc
ttgaccctcgaggtgttgaagggcaccaccaaagccttcgatactgacattcacgctgtt
cgccctcatcgtgggcaagttgaagtcgcttttcggtttcggtccctcttggactcagat
caccacccatctgaaatagcagaaagtcacaggttctgtgatcgtgttcaggacgcttac
accttgcgctgctgtccacagatccacggtgtggtgaacgacacaatagcatttgtgaag
aacatcattaccacagaaattaacagtgctacagataatcctatggtctttgccagcagg
ggagagactgtttctggaggaaacttccacggtgaatatccagccaaagccctggactat
ttggccattggcgtccatgaacttgctgcaattagtgaaagaagaattgaaaggctctgc
aacccctccctcagcgagctgcctgccttcctggtggctgaaggtggtctgaactctgga
ttcatgatagcccactgcacagctgcagccctggtttctgagaacaaggccctatgccac
ccctcgtccgtggactctctctccaccagtgccgccacggaggaccatgtctccatggga
ggatgggcagcaaggaaagccctcagggtcattgagcacgtggagcaagtgctggccatc
gagcttcttgcagcctgccaagggatagagtttctacgccctttgaaaactaccactcca
ctggagaaggtctatgacctggtgcgctcagttgtaaggccctggataaaagatcgcttc
atggccccagacattgaggcagcgcacagactgctcatagagcagaaggtttgggaagtg
gctgcaccatacatcgaaaaatacagaatggagcatgttccagaatcaagacctgtttct
ccaacagcattttcactggaatttctgcacaagaaatcgaccaaaatcccagagtctgag
gatgtttaa
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