KEGG   Phocoena sinus (vaquita): 116760676
Entry
116760676         CDS       T07759                                 
Symbol
KDM5A
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psiu01009]
    116760676 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116760676 (KDM5A)
Enzymes [BR:psiu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116760676 (KDM5A)
Protein phosphatases and associated proteins [BR:psiu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116760676 (KDM5A)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116760676 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 116760676
NCBI-ProteinID: XP_032501805
LinkDB
Position
10:complement(100160568..100242310)
AA seq 1689 aa
MAAVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEVVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPNLDLKEKVEPEVLGTDVQTPPEPGTRVNILPKRTRRVKSQSESGEVNRNTELKKLR
IFGAGPKVVGLAMGVKDKEDEVSRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVS
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLLTEEETRLRESVMQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRY
PLEDLPSLLYGVKVRAQSYDTWVSRVTEALAANFSHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSGLYVELPELARLKQELQQ
ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTTKVEAIQSGSNYAYL
EQLESLSAKGRPLPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTATVVAVFKEXEQKEIEA
MHSLRAANLAKMSMVDRIEEVKFCICRKTASGLCSSVKLCKDWFHNSCVPLPKSSSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRX
RQALATEELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSA
FNRVVSSVSSSPRQTVDYDDEETDSDEDIRETYGCDAKDTASVKSSSSLEPSLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSNTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKIKGKD
SSEKKRKRKLEKEQLFGEGKQKSKELKKMDKPKKKKLKLSVEKSKELNKLAKKLAKEEER
KKKKEKAAAAKVELVKECSEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKD
KVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICTNCAKKQGPDSPGPAAPPSFIMSYKL
PVEDLKETS
NT seq 5070 nt   +upstreamnt  +downstreamnt
atggcggccgtggggccggggggctacgcggcggagttcgtgccgcctccggagtgcccg
gtctttgagcccagctgggaggagttcacagatccgctcagcttcatcggccgcatccgg
cccctggcggagaaaaccggcatctgcaaaatccgaccgcccaaggattggcagcctcca
tttgcatgtgaagtaaaaagcttccgttttactcccagagtccagcgtctgaatgaactt
gaggcaatgaccagagtgagattggacttcttggatcaactagcaaaattttgggagctt
caggggtctaccctcaagatccctgtggtggagagaaaaattctggatctttatgcttta
agcaagattgttgccagcaaaggtggttttgaagtggtcaccaaagagaagaaatggtct
aaagtgggtagccgcttgggatatctgccaggaaagggaactgggtctcttttgaagtca
cattatgaaagaattctctacccatatgagcttttccagtctggtgtcagcctcatgggt
gtacaaatgcctaatttagatcttaaggaaaaagtggagcctgaggttcttggcactgat
gtccaaactcccccagagccgggcacaagagtgaacattctgccgaagagaacaaggcgt
gtcaagtctcagtcagaatctggagaagtgaatagaaacacggaactgaagaaacttcgg
atttttggggctgggcctaaggttgtgggcttggcaatgggagtaaaagataaagaagat
gaggtctcccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcaaatgaga
caacggaaaggaactctctctgttaactttgttgatctttacgtttgtatgttttgtggt
cggggaaataatgaagataaattgctgttgtgtgatggatgtgatgacagctatcataca
ttttgtttaattcccccactacctgatgtgcccaaaggagactggaggtgtcctaaatgt
gtcgctgaggaatgtaataaacctagagaagcctttggatttgaacaagctgtacgagag
tatacacttcagagctttggagagatggcagataattttaagtctgactatttcaacatg
ccagttcatatggttcccacagaactagtggagaaggaattctggcggctggtgagcagc
attgaagaagatgttatcgtagagtatggagctgacatctcctcaaaagactttggaagt
ggatttcctgtaaaggatggtcggagaaagatgctgccagaagaagaggaatatgcgctt
tctggttggaacttgaataacatgcctgttctagagcagtcggttcttgcacacatcaat
gtggacatctctggcatgaaggtgccgtggctttatgtgggaatgtgcttctcttccttc
tgctggcacatcgaagatcactggagctattccatcaactacttgcactggggggagcca
aagacatggtatggtgtgccatctcatgctgcagaacaactggaggaggtgatgagggag
ctggcccctgagttatttgaatcccagcctgatctcctacatcagttagtcaccatcatg
aaccccaatgtgctaatggagcatggtgtgcctgtgtataggacgaatcagtgtgctggc
gagtttgttgtgacgtttcctcgggcctatcactctggatttaatcaaggctacaacttc
gctgaggctgtgaacttctgtactgctgactggttgcccattggccgtcagtgtgtcagt
cattaccgtcggctgaggcgccattgtgtcttctcgcacgaggaactaattttcaagatg
gcagcagatccggaatgcttggacgtggggcttgccgccatggtgtgcaaggagttgact
ctcctgactgaagaggagacacggttaagggagtctgttatgcagatgggcgtcctgatg
tcggaagaagaagtgtttgaacttgttcccgatgatgagcgacagtgttcagcctgcaga
accacctgttttctctctgctctcacgtgttcctgtaatcctgagcggcttgtgtgtctc
taccatccaactgatctgtgcccctgccccatgcagaaaaaatgtcttagatatcgctac
ccattagaggacctcccttctctgctgtatggtgtgaaagtcagggcacagtcgtatgac
acttgggtcagtcgtgttacagaagcattagctgccaacttcagccacaagaaagatttg
attgaattacgagtaatgctggaagatgctgaggataggaaatatccagaaaacgatctc
tttcgaaaactcagggatgctgtaaaagaagcggagacctgtgcttctgtggctcagctg
cttctgagcaaaaagcagaagcacaggcagagcccagatagtgggaggactcggaccaaa
ctgacagtggaagagttgaaggcctttgtccaacagctttttagtcttccatgtgtcatc
agccaagctcgacaagtaaagaatctgctggatgatgtggaagagtttcatgaacgtgct
caggaggccatgatggatgaaaccccagattcttccaaactgcagatgttgatagatatg
ggctctggtctctacgtggagctacctgaattagcccgactaaagcaagagctacagcag
gctcgatggttggacgaagtacgactgaccctgtcagatccacaacaggtcactttggat
gtcatgaagaaattgatagactctggggtggggttggcaccccaccatgcggtggagaaa
gcgatggctgagcttcaggagctcctcacggtctctgagcgatgggaggaaaaggccaag
gtctgcctgcaggcaagaccacggcacagtgtggcaagtttagaaagcatcgtgaatgaa
gctaagaatattccagcctttctacccaatgtgttgtccctgaaagaagccttacaaaag
gctcgagaatggacaaccaaagtggaagctattcagagtggcagcaattatgcttacttg
gagcagctggaaagcttatctgccaaaggccgccctctccctgtgcgtcttgatgcgttg
ccccaggtggagtcacaagtggcggcagcacgggcctggagagaacggactgggaggacc
tttcttaagaagaattccagccacacgttgctccaggtgcttagtccccgaactgacatt
ggtatttatgggagtggaaaaaatagaaggaaaaaagtaaaagaactaatagaaaaagaa
aaagaaaaggatctggaccttgaacctctcagtgatctggaggagggattggaggaaacc
agagatacagccacagtggtggcagttttcaaagaancggagcaaaaagagattgaagcc
atgcattccctcagagcagccaacctagccaagatgtcaatggtagaccgcatagaagaa
gtaaaattttgcatttgccgcaagacagcaagtgggttatgctccagtgtgaagctctgc
aaagactggtttcataacagctgtgttcctcttcctaagtccagttcccagaagaaaggg
tctagctggcaggccaaagaagtaaagttcctttgccctctctgtatgcggtctcgaaga
cctaggctagagaccattctgtccctcctggtatcccttcagaagttgcctgtacggctg
cctgaaggagaggcccttcagtgtttgacagaacgtgcaatgagttggcaggacaggngc
cggcaagccctggccacagaggagctgtcctctgccctggccaagctctctgtgttgagc
cagcggatggtggagcaggcagctcgggagaaaactgagaagatcatcagcgcagagctc
caaaaagccgctgccaatccagacttacaggggcacttgcctagtttccagcagtctgct
tttaaccgggtggtgagcagtgtatcttcttcccctcggcaaacggtggactatgatgat
gaagagacggattctgatgaagacattcgggagacatacggctgtgacgcgaaggacaca
gccagtgtgaaatcctccagcagtctggagcccagcctattttgtgatgaagagattccc
atcaagtccgaggaggtggtcacgcacatgtggacggcaccctccttctgtgctgagcat
gcttattcgtctgcttctaagagctgttctcaaggttctaacaccccaaggaaacaacct
cggaagagccctctggtgccccgtagtttggagcctccggtgctagagttatcgcctgga
gctaaagcccagctggaagaacttatgatggttggagatctcctggaggtgtctctggat
gagactcaacacatatggcggattttgcaggccacacacccaccctctgaagacagattc
ctgcatatcatggaggatgacagcatggaagagaaaccattaaaaataaaaggaaaggac
tcttcagagaagaaacggaaacggaagctagaaaaagaacagctttttggcgaaggaaag
cagaagtccaaggagctaaagaaaatggataaacctaaaaagaagaaattaaaattaagt
gtggaaaaatcaaaggagctgaacaagctggccaagaaactagcaaaagaagaagagagg
aagaaaaagaaggagaaggctgctgcagccaaagttgaacttgtgaaggagtgctcggag
aagaagagagagaagaaggtgctggacatcccctccaaatatgactggtcaggagcagag
gagtctgacgacgagaacgctgtgtgtgccgcgcagaactgccagaggccctgcaaggac
aaggtagactgggtgcagtgtgatggtggctgtgatgagtggtttcaccaagtttgtgtg
ggtgtatctccagaaatggctgaaaatgaagattacatctgtacaaactgtgcaaagaag
caggggccagatagcccaggtccagcagcacctccttctttcataatgagctacaagcta
ccagtggaggaccttaaagagaccagttag

DBGET integrated database retrieval system