Phocoena sinus (vaquita): 116760704
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Entry
116760704 CDS
T07759
Symbol
TUBA1A
Name
(RefSeq) tubulin alpha-1A chain isoform X1
KO
K07374
tubulin alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04145
Phagosome
psiu04210
Apoptosis
psiu04530
Tight junction
psiu04540
Gap junction
psiu04814
Motor proteins
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116760704 (TUBA1A)
09143 Cell growth and death
04210 Apoptosis
116760704 (TUBA1A)
09144 Cellular community - eukaryotes
04530 Tight junction
116760704 (TUBA1A)
04540 Gap junction
116760704 (TUBA1A)
09142 Cell motility
04814 Motor proteins
116760704 (TUBA1A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116760704 (TUBA1A)
09164 Neurodegenerative disease
05010 Alzheimer disease
116760704 (TUBA1A)
05012 Parkinson disease
116760704 (TUBA1A)
05014 Amyotrophic lateral sclerosis
116760704 (TUBA1A)
05016 Huntington disease
116760704 (TUBA1A)
05020 Prion disease
116760704 (TUBA1A)
05022 Pathways of neurodegeneration - multiple diseases
116760704 (TUBA1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116760704 (TUBA1A)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116760704 (TUBA1A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116760704 (TUBA1A)
04147 Exosome [BR:
psiu04147
]
116760704 (TUBA1A)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116760704 (TUBA1A)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
116760704 (TUBA1A)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
116760704 (TUBA1A)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116760704 (TUBA1A)
Exosomal proteins of other body fluids (saliva and urine)
116760704 (TUBA1A)
Exosomal proteins of colorectal cancer cells
116760704 (TUBA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
116760704
NCBI-ProteinID:
XP_032501889
Ensembl:
ENSPSNG00000010994
UniProt:
A0A8C9BXV8
LinkDB
All DBs
Position
10:64415860..64420298
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcctgatggccagatgccaagtgacaag
actattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaaa
catgtgcccagggcagtgtttgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggac
cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc
tttggcgggggaactggttccggattcacctccctgctgatggaacgtctctctgtcgat
tatggcaagaagtccaagctggagttctccatttacccagcccctcaggtttccacagct
gtagttgagccctacaactccatcctcaccactcacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgag
cgcccaacatatactaacctgaataggttgataggtcaaattgtgtcctccatcactgct
tccctgcgatttgatggagccctgaatgttgatctgacagaattccagaccaacctggtg
ccctatcctcgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttccgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgcgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggcgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggagacctggccaaagtacagcgagctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggtgtggattctgtt
gaaggagagggagaggaagaaggagaggaatactaa
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