KEGG   Phocoena sinus (vaquita): 116760705
Entry
116760705         CDS       T07759                                 
Name
(RefSeq) tubulin alpha-1C chain-like
  KO
K07374  tubulin alpha
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04145  Phagosome
psiu04210  Apoptosis
psiu04517  IgSF CAM signaling
psiu04530  Tight junction
psiu04540  Gap junction
psiu04814  Motor proteins
psiu05010  Alzheimer disease
psiu05012  Parkinson disease
psiu05014  Amyotrophic lateral sclerosis
psiu05016  Huntington disease
psiu05020  Prion disease
psiu05022  Pathways of neurodegeneration - multiple diseases
psiu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    116760705
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116760705
  09143 Cell growth and death
   04210 Apoptosis
    116760705
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116760705
   04540 Gap junction
    116760705
  09142 Cell motility
   04814 Motor proteins
    116760705
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116760705
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    116760705
   05012 Parkinson disease
    116760705
   05014 Amyotrophic lateral sclerosis
    116760705
   05016 Huntington disease
    116760705
   05020 Prion disease
    116760705
   05022 Pathways of neurodegeneration - multiple diseases
    116760705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psiu03019]
    116760705
   03036 Chromosome and associated proteins [BR:psiu03036]
    116760705
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116760705
   04147 Exosome [BR:psiu04147]
    116760705
Messenger RNA biogenesis [BR:psiu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116760705
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     116760705
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    116760705
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116760705
  Exosomal proteins of other body fluids (saliva and urine)
   116760705
  Exosomal proteins of colorectal cancer cells
   116760705
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 116760705
NCBI-ProteinID: XP_032501891
Ensembl: ENSPSNG00000010933
UniProt: A0A8C9BU22
LinkDB
Position
10:complement(64342094..64348744)
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFSTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEVIDLVLD
RVRKLADQCTGLQGFLVFRSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEEEDEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagatcggcaatgcctgt
tgggagctctactgcctggaacacggcatccagcctgatggccagatgccaagtgacaag
actattgggggaggagatgactccttcagcaccttcttcagtgagacaggcgctggcaaa
catgtgcccagggcagtgtttgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgaggtcactacaccattggcaaggaggtcattgacctagtcttggac
cgagttcggaaactggctgaccagtgcacaggccttcagggcttcttggttttccgcagc
tttggtgggggaactggttctgggttcacctccctgctgatggaacgtctctctgtcgat
tatggcaagaagtccaagctggagttctccgtttaccccgcccctcaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaacgaggccatctatgacatctgtcgtagaaacctcgacattgag
cgcccatcatacacaaatcttaaccgccttatgagccagattgtgtcctccatcaccgct
tccctgcgatttgatggagccctgaatgttgatctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacgtatgcccccgtcatctctgctgagaaa
gcctaccatgaacagcttactgtagcagagatcaccaattcttgctttgagccagccaac
cagatggtgaaatgcgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggcgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggagacctggccaaagtacagcgagctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggagctgatagtgtt
gagggagaagaggaggatgaagaatattaa

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