Phocoena sinus (vaquita): 116760721
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Entry
116760721 CDS
T07759
Symbol
SLCO1C1
Name
(RefSeq) LOW QUALITY PROTEIN: solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04081
Hormone signaling
psiu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116760721 (SLCO1C1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116760721 (SLCO1C1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116760721 (SLCO1C1)
Transporters [BR:
psiu02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
116760721 (SLCO1C1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
116760721
NCBI-ProteinID:
XP_032501917
Ensembl:
ENSPSNG00000010173
LinkDB
All DBs
Position
10:complement(86349677..86403358)
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AA seq
712 aa
AA seq
DB search
MDTSSKENIQLFSKNSMQPVGRPSFKTEYPSSEEKQPCCGELKVFLGALSFVYFAKALAE
GYLKSTITQIERRFDIPSSLVGVIDGSFEIGNLLVITFVSYFGAKLHRPKIIGAGCLIMG
VGTLLIAMPHFFMEQYRYERYSPFSNSTFSISPCFLGSNSPLPISVMEKSQSKINNECEI
DAGSSMWAYVFLGNLLRGIGETPIQPLGIAYLDDFANEDNAAFYIGCVQTVAIIGPIFGF
LLGSLCAKLYVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGSISLLAAVPFWYLPKSLP
RPRSREDSNSSSEKSKFIMDDPTDYQTPLGEKAKIMEMARGFLPSLKSLFGNPVYFLYLC
ASTVQFNSLFGMVTYKPKYIEQHYGXSSSKANFVIGLINIPAVAFGIFSGGIVMKKFRIS
VCGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVSYQGTKPVSYHERALFSDCNSRC
KCSETKWEPMCGANGITYASACLAGCQTSTGSGKTTIFNNCTCVGIATSESGNSSGMVGR
CQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAVRVLA
GIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNAFRHMYLGLTMILGTMSIFLSIAV
LFTLKKKYVSKHRSFRTKRERTMVSTRISKENCTTSDHLLQPSYWPGKETQL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatccaaagaaaatatccagttattcagcaaaaattcaatgcaacctgtt
gggaggccttcctttaaaacagaatatccctcctcagaggagaaacaaccctgctgtggt
gaactaaaggtgttcttgggtgccctgtcttttgtttactttgccaaagcactggcagaa
ggctacctgaagagcaccatcactcagatagagagaaggtttgatatcccttcttcactg
gtgggagttattgatggtagttttgaaattggaaatctcttagttataacatttgttagc
tactttggagccaaacttcacaggccaaaaataattggagcagggtgcctaatcatgggc
gttggaacattgctcattgcaatgcctcatttcttcatggagcagtacagatatgaaagg
tattctcccttctccaattccactttcagcatctctccgtgtttcctggggtcaaacagt
ccgttaccaatctcagttatggaaaaatcacaatccaaaataaataatgaatgtgaaatt
gatgctggctcctccatgtgggcttatgtcttcctggggaaccttcttcgtggcattgga
gaaactcccattcagcctctaggcattgcctaccttgatgattttgctaatgaggacaac
gcggctttctatattgggtgtgtgcagacggttgcaattataggaccaatctttggcttc
ctgttaggctcattatgtgccaaactgtatgttgacattggctttgtaaatctagatcat
ataaccatcaccccaaaggacccacagtgggtgggtgcctggtggcttggttatctaata
gcaggaagcataagtcttctggcagctgtgcctttctggtatttaccaaagagtctacca
agaccccggagcagagaggattccaattcctcctctgagaaatctaagtttattatggat
gatcccacagactaccaaacacctcttggagaaaaagcaaaaatcatggaaatggcaaga
ggttttcttccatcactgaagagtctttttggaaatccagtgtacttcttatatttgtgt
gcaagcaccgttcagttcaattccttatttggcatggtgacttataaaccgaagtacatt
gagcaacactatggcnagtcatcctctaaggccaactttgttatcgggctcatcaatata
cctgcagtggcctttggaatattctctggggggatagtcatgaaaaaattcagaatcagt
gtgtgtggagctgcaaagctctacttgggatcatctgtccttgggtacctcctattcctt
tccctttttgcattgggctgtgaaaattctgatgtggcaggactaacagtctcctaccaa
ggaaccaaacctgtctcttatcatgaacgagctctcttttcagattgcaactcaagatgc
aaatgttcagagacaaaatgggaacccatgtgtggtgcaaatggaattacatatgcatcg
gcttgccttgctggttgtcaaacctccaccgggagtggaaagactactatatttaataac
tgcacctgtgtgggaattgccacctcagaatcaggaaattcctcaggcatggtgggcaga
tgtcaaaaagataatggatgtccccaaatgtttctgtatttccttgtaatttcagtcatc
acatcctatactttatctctaggcgggatacctggatacatattgcttctgaggtgcatt
aagccacaacttaagtcttttgccctgggtatctacaccttagcagtaagagttcttgca
ggaatcccagctcccgtatattttggagttttgattgatacttcatgcctcaaatgggga
tttaaaagatgtggaagtagaggatcctgcagattatatgactcaaatgcttttagacac
atgtatctgggactaaccatgatccttggcacaatgtccattttcctaagtattgcagta
cttttcactttaaagaaaaagtatgtttcaaaacacagaagcttcagaaccaagagagaa
agaacaatggtgtctacaagaatcagtaaggaaaactgtacgacaagtgatcatttgcta
caacccagctattggccaggcaaagaaacgcagctttag
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