Phocoena sinus (vaquita): 116760731
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Entry
116760731 CDS
T07759
Symbol
SAMM50
Name
(RefSeq) sorting and assembly machinery component 50 homolog isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116760731 (SAMM50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116760731 (SAMM50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116760731 (SAMM50)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
116760731 (SAMM50)
Transporters [BR:
psiu02000
]
Other transporters
Pores ion channels [TC:
1
]
116760731 (SAMM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
116760731
NCBI-ProteinID:
XP_032501937
Ensembl:
ENSPSNG00000022286
UniProt:
A0A8C9EET6
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All DBs
Position
10:complement(5426127..5458654)
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AA seq
469 aa
AA seq
DB search
MGTVHARSLEPLPASGPDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLGRTKD
DIIMCEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDSALPNGLDVTF
EVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQ
PGNFERNFSVNVYKVTGQFPWSSLRETDRGVSAEYNFPIWKTSHAVKWEGVWRELGCLAR
TVSFAVRKESGHSLKSSLSHAMVLDSRNASILPRRGALLKVNQELAGYTGGDVSFIKEDF
ELQLNKQLILDSVFSASLWGGMLVPIGDKPSSIADRFYLGGPTSVRGFNMHSVGPQSEGD
YLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGNLCNLNYGEGPRAHIRKLAE
CIRWSYGAGIVLRLGNIARLELNYCVPMGVQGGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggacagtgcacgccaggagtttggagcctcttccagccagtggacctgattttgga
gcattaggagaagaagctgaatttgttgaagttgaacctgaagctaaacaggagattctt
gagaacaaggatgtggttgtccagcacgttcattttgatgggcttggaaggactaaagat
gacatcatcatgtgtgaaattggagatgtttttaaggctaaaaaccttatcgaggtaatg
aggaaatctcacgaagcccgtgagaaattgcttcgtctgggaatatttagacaggtggat
gtcttgatcgatacatgtcaaggtgacagtgctcttcccaacgggttagacgttaccttt
gaagtaactgaattaaggaggttaacgggcagttacaacaccatggttgggaacaacgaa
ggcagcatggtacttggcctcaaactccctaatcttctaggccgtgcagaaaaggtgact
tttcagttttcctatggaacaaaagaaacttcgtatggcctgtccttcttcaaaccacag
cctggaaacttcgaaagaaatttctctgtaaacgtatataaagttacgggccagttccct
tggagctcactgcgcgagacagacagaggagtatcagccgagtacaactttcccatttgg
aagaccagccacgctgtgaagtgggagggcgtgtggcgagagctgggctgccttgccagg
acagtgtcttttgccgtccgaaaagagagcgggcactcgctgaagtcatctctctcgcac
gcgatggtcctcgactctcggaacgcttccatcttaccgaggagaggtgctttgctgaag
gtgaaccaggagctggcaggctacaccggaggggatgtgagcttcataaaagaagacttt
gagcttcagctgaataagcagctcatacttgattcagttttttcagcatctctctggggt
ggaatgttggtacccattggtgataaaccatcaagtattgctgatcggttttacctcggg
ggacccacaagtgtgcgagggttcaacatgcacagcgttgggccacagagcgaaggagac
tacctgggcggagaagcgtattgggccggtggcctgcacctgtacaccccgttacctttc
cgaccgggccagggcggctttggagagctcttcagaactcacttcttcctcaacgcagga
aacctctgcaacctcaactatggggagggccccagagctcacattcgaaagctggctgag
tgcatccgctggtcttatggcgcagggatcgtcctcaggctgggcaacatcgcgcggctg
gagctgaactactgcgtccccatgggcgtgcagggcggagacaggatctgtgatggcgtc
cagtttggagctgggatacggttcctgtag
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