Phocoena sinus (vaquita): 116760801
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Entry
116760801 CDS
T07759
Symbol
SNRPF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116760801 (SNRPF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116760801 (SNRPF)
03041 Spliceosome [BR:
psiu03041
]
116760801 (SNRPF)
03032 DNA replication proteins [BR:
psiu03032
]
116760801 (SNRPF)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116760801 (SNRPF)
Spliceosome [BR:
psiu03041
]
Complex A
U1 snRNP components
Sm proteins
116760801 (SNRPF)
U2 snRNP components
116760801 (SNRPF)
Complex B
U1 snRNP components
116760801 (SNRPF)
U4/U6.U5 tri-snRNP components
116760801 (SNRPF)
Complex C
U2 snRNP components
116760801 (SNRPF)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116760801 (SNRPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
116760801
NCBI-ProteinID:
XP_032502113
Ensembl:
ENSPSNG00000013139
UniProt:
A0A8C9C5A9
LinkDB
All DBs
Position
10:complement(25423927..25432056)
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcccctcaatcccaaacctttcctcaatggattaacaggaaagccagtaatg
gtgaagcttaagtggggaatggagtacaaaggctacctggtgtctgtagatggctatatg
aacatgcagcttgcaaacacagaagaatacatagatggagcattatctggacatctgggt
gaagttttaataaggtgtaataatgtcctttatatcaggggtgttgaagaagaagaagaa
gatggggaaatgagagaatag
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