Phocoena sinus (vaquita): 116760811
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Entry
116760811 CDS
T07759
Symbol
ABCD2
Name
(RefSeq) ATP-binding cassette sub-family D member 2 isoform X1
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu02010
ABC transporters
psiu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116760811 (ABCD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116760811 (ABCD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116760811 (ABCD2)
Enzymes [BR:
psiu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
116760811 (ABCD2)
Transporters [BR:
psiu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
116760811 (ABCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Rad17
AAA_23
AAA_29
SMC_N
ORC-CDC6-like
RVP
AAA_27
HEAT_EF3_N
ARID
Motif
Other DBs
NCBI-GeneID:
116760811
NCBI-ProteinID:
XP_032502142
Ensembl:
ENSPSNG00000021149
LinkDB
All DBs
Position
10:73500832..73578571
Genome browser
AA seq
741 aa
AA seq
DB search
MIHMLNAAADRVKWTRSRTAKRAACVVAAAYALKTLCPIIGKRLKQSGHWKKKEAYPAAE
NREILHCTEATCKKPSPGVNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFLS
IYVAGLDGKIVKSIVEKKPRTFIIKLIKWLMIAIPATFVNSAIRYLEGKLALAFRTRLVD
HAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYT
LIKTATSRGASPIGPTLLAGLVVYATAKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIA
NVEEIAFYRGHKVEMKQLQKSYKALANQMNLILSKRLWYIMIEQFLMKYVWSSSGLIMVA
LPIITATGFADGDLEDDRKQAMVSERTEAFTTARNLLASGADAIERIMSSYKEITELAGY
TARVYNMFWVFDEVKRGIYKRTAVLQESENHSKGGVNVELPLSETLEIKGKVIDVDHGII
CENVPIITPTGEVVASKLKFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYEGILYKPP
PQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHDKGYTDHDLDCILHNVHLYHIVQREGGW
DAVMDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKGAGISLL
SITHRPSLWKYHTHLLQFDGEGGWRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNE
LCKILGEDSVLKTIKNEDETS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatacatatgctaaatgcagcagctgatcgagtgaaatggaccagatcgaggactgct
aaaagggctgcctgcgtggtggctgcagcatatgctctgaaaaccctctgtcccatcatt
ggcaagcgtttaaagcaatctggccactggaagaaaaaagaagcttacccggctgcagag
aatagagaaatactgcattgcaccgaggccacttgtaaaaaaccttcgcctggagtgaat
gcagattttttcaaacagctactagaacttcggaaaattctcttccctaaacttgtgacc
actgagacaggatggctctgcctccactcggtagctctaatctcaagaacctttctatct
atctatgtagctggtttggatggaaaaatcgtgaaaagcattgtggaaaagaagcctcgg
actttcatcatcaaattaatcaagtggcttatgattgccatccctgccacctttgtcaac
agtgcaataaggtacctagagggcaaattggccttggccttcagaacccgcctagtcgac
catgcctatgaaacctattttacaaatcagacttattataaggtgatcaatatggatggg
aggctggcaaaccctgaccagtctcttactgaggatattatgatgttctctcaatctgtg
gctcacttgtattccaatctgaccaaacctattttagatgtaatcctgacttcctatacg
ctcatcaagactgctacatccagaggagcaagcccaattgggcccacccttttagcaggg
cttgtggtatatgccactgctaaagtgttaaaagcctgctctcccaaatttggtaaattg
gtggctgaagaagctcataggaaaggctatttgcggtatgtgcactccagaattatagcc
aatgttgaagaaattgccttctacagaggacataaggtagaaatgaagcaactccagaaa
agttacaaagctttagcaaatcagatgaacctcattttatccaaacgtttgtggtacatt
atgatagagcagttcttgatgaagtatgtttggagcagcagtggactaattatggtggct
ctacctattatcactgcaactggctttgcagatggtgatctagaggatgatcgaaagcaa
gctatggttagtgagcggacagaagcgtttaccactgctcgaaatttattggcctctgga
gctgatgctattgaaaggattatgtcttcatacaaagagataactgaattagcaggctat
actgctcgagtatacaacatgttttgggtctttgatgaagtaaaaagaggcatttataag
agaactgctgtcttgcaagagtctgaaaaccatagcaagggtggagttaacgtagaatta
cccctcagtgagacattggaaatcaaaggaaaagttattgatgtggatcatggaattatt
tgtgaaaatgttcccataattacaccaacgggagaagtggtggcttccaagctaaagttc
aaagtagaagaaggaatgcatcttttgataactggtcccaatggttgtgggaaaagttct
ctcttcagaattttaagtgggctctggcctgtgtatgaaggaatcctatataaaccaccc
ccacaacatatgttctatattccacaaaggccgtacatgtctcttggaagtcttcgggat
caagtcatttatccagattcagtggatgacatgcatgataaaggctatacagaccacgat
ctagattgtattctacataatgttcacctctatcatatagttcaaagagaaggaggatgg
gatgctgttatggactggaaagatgtcctgtcaggaggggaaaagcaaagaatgggcatg
gctcgcatgttttatcatagaccaaaatatgcattgctggatgaatgcaccagcgctgtc
agcattgatgttgaaggaaagatatttcaggctgcaaaaggggctggaatttccttactt
tctataacacacaggccttctctttggaaataccacactcatttattacagtttgatggt
gaaggaggttggcgctttgaacaattggacactgctattcgtttaacactaagtgaagaa
aaacaaaagctagaatctcagctagctggaattcccaaaatgcagcagagactcaatgaa
ctatgtaaaattttgggagaagactcggtgctgaaaacaataaaaaatgaagatgagaca
tcctaa
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