Phocoena sinus (vaquita): 116760899
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Entry
116760899 CDS
T07759
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116760899 (PWP1)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
90S particles
Other 90S particles
116760899 (PWP1)
Pre-60S particles
Other pre-60S particles
116760899 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
WD40_RFWD3
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WDR54
Beta-prop_SPT8
Beta-prop_DCAF12
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
116760899
NCBI-ProteinID:
XP_032502316
Ensembl:
ENSPSNG00000008057
UniProt:
A0A8C9BIY8
LinkDB
All DBs
Position
10:complement(14968243..14989847)
Genome browser
AA seq
500 aa
AA seq
DB search
MNRSRQVTCVAWVRCGVARETPDKVELSKEEVKRLIAEAKEKLQEEGGSDEEETGNPSED
GMQSARTQARPQEPLEDGDPEDDRTLDDDELAEYALDKYDEEGDPDTETLGESLLGLTVY
GSNDQDPYVTLKDTEQYEREDFLIKPNDNLIVCGRAEQDQCNLEVHVYNQEEDSFYVHHD
ILLSAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKK
KKKKGKKNSSADGHTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDK
VQTLQFHPFEAQTLISGSYDKSVALYDCRSPEESHRMWRFSGQIERVTWNHFSPCHFLAS
TDDGFVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPS
LVHSRDMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTISSVNEAFGRRERLVLSNT
RNSSVSGPFGSRSSATPMES
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagccgccaggtgacgtgcgtggcctgggtccgctgcggcgtggccagagag
acgccagacaaggtagagcttagtaaagaagaagtgaaacgtctcattgctgaagcaaag
gaaaaattacaagaagaaggtggcagtgatgaagaggagacaggcaatccttcagaagat
ggcatgcagagtgcccgtacccaggcccgaccccaggagcccctggaggatggcgaccca
gaggatgacaggacgctggatgatgatgagctggccgagtatgccttagataaatatgat
gaggaaggcgacccagatactgaaactcttggtgaatctcttttgggtcttacagtctat
gggagtaatgatcaagatccttatgttactctgaaagatacggagcagtacgaacgtgaa
gatttcttgattaagcccaatgacaatctcatagtttgtggcagagctgaacaggaccag
tgcaatctagaggtacatgtttataatcaagaagaagattctttttatgtccaccatgat
atcctgttgtctgcataccctttgagtgtggaatggctgaattttgatcctagcccggat
gattcaactggaaattacattgctgtgggaaacatgacccccgttattgaagtgtgggac
cttgatatagtggactctttggagccagtctttacacttggaagtaagctatcaaaaaag
aagaaaaagaaaggaaagaagaattcctcagcagatgggcataccgatgctgtccttgac
ctttcttggaataagctgatcagaaatgtgctggccagtgcatcagctgataacactgtt
attctgtgggatatgtccttggggaaaccagcagccagccttgccgtacatacagacaag
gtccagactctccagtttcatccatttgaagcacagactctgatttctggatcatatgat
aagtcggtggctttgtatgactgccgaagtccagaggaaagccatcgaatgtggcgattc
agtgggcagatcgagagagtgacttggaatcacttttcaccttgtcattttttggccagt
acagatgacggctttgtatataatttggatgcacgttcagataagccaatttttacactt
aatgcacacaatgatgaaatttctggtcttgatctaagtagtcaaatcaagggctgtctt
gtgactgcatcagcggacaagtatgtgaagatctgggacatattaggagataggccaagc
ctagttcactctagggacatgaaaatgggagttctcttctgttcttcctgttgccctgat
ttaccctttatttatgcttttggaggtcagaaagaagggcttcgggtctgggatataagc
acaatctcttcagtaaatgaagcatttggaagacgagagaggcttgttctcagcaataca
agaaattcatctgttagtggcccttttgggagcaggagctcagcaacaccaatggagtct
taa
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