KEGG   Phocoena sinus (vaquita): 116760928
Entry
116760928         CDS       T07759                                 
Symbol
LTBR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3
  KO
K03159  lymphotoxin beta receptor TNFR superfamily member 3
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04060  Cytokine-cytokine receptor interaction
psiu04061  Viral protein interaction with cytokine and cytokine receptor
psiu04064  NF-kappa B signaling pathway
psiu04066  HIF-1 signaling pathway
psiu04672  Intestinal immune network for IgA production
psiu05166  Human T-cell leukemia virus 1 infection
psiu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    116760928 (LTBR)
   04066 HIF-1 signaling pathway
    116760928 (LTBR)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116760928 (LTBR)
   04061 Viral protein interaction with cytokine and cytokine receptor
    116760928 (LTBR)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    116760928 (LTBR)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    116760928 (LTBR)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116760928 (LTBR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:psiu04050]
    116760928 (LTBR)
Cytokine receptors [BR:psiu04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   116760928 (LTBR)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 116760928
NCBI-ProteinID: XP_032502365
Ensembl: ENSPSNG00000007107
UniProt: A0A8C9BIY9
LinkDB
Position
10:complement(96899239..96905842)
AA seq 421 aa
MRLPWAASPRGLAWGPLILGLWGLLAASQPQLVPPYRTENQTCWDRETEYYEPKHRVCCS
RCPPGTHVSAECGPDRDTTCATCPENSYNEHWNHLSICQLCRPCDQMLGFVEITPCTSKH
KTQCRCQPGLFCVFWGSECVHCESLSHCPPGTEAELKDEDRKANSNCVPCKAGHFQNTSS
PSARCQPHTRCEDQGLVEAAPGTSRSDTSCRNPPEPSETPGMMLVLAVLLPLVSLLLLTT
VFACTWKSHPSLCRKLGSLLKRHPEGEESNTAEGSWEPPRVNPQYPDLVEPLLPTSGDLT
PASAGLPASPGLEEEALQQQSPLSQARELEAELPEQGQVAHGTNGIHVTGGSVTVTGNIY
IYNGPVLGGARGPGDTPAPPEPPYPIPEEGAPSPPGLSTPYQEDGKAWHLAETETLGCHT
P
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgcctgccgtgggccgcctccccccgcggcctggcctgggggccgctcatattgggc
ctctggggtctcctggcagcatcccagccccagctggtgcccccctaccgcacggagaac
caaacctgctgggaccgggaaacggagtactacgagcccaagcatcgcgtctgctgctcc
cgctgccccccaggcacacacgtctcggctgaatgtggccccgaccgggacaccacttgt
gccacgtgccccgaaaattcctacaacgagcactggaaccatctctccatctgccagctg
tgccgcccctgtgaccagatgctgggcttcgtggagatcacgccttgcactagcaaacac
aaaacccagtgccgctgccagccaggactcttctgcgtcttttggggctctgagtgtgta
cactgcgagtcactctcccactgcccgcctggcactgaagccgagctcaaagatgaagac
aggaaggctaacagcaactgtgttccctgtaaggcagggcacttccagaacacctcctcc
cccagcgcccgctgccagccccacaccaggtgtgaggaccagggcctcgtagaggcagca
ccaggcacctcccggtctgataccagctgcagaaatccgccagagccctccgagacgcca
ggaatgatgctggtgctggccgtcttgctgccgctggtctccttgctgcttctcaccact
gtgttcgcctgcacctggaagagccacccctctctctgcagaaagctgggatccctgctc
aagaggcacccagagggagaggaatcaaatactgctgaaggaagctgggagcccccgagg
gtcaacccacagtaccctgacctggtagagccacttctgcccacctctggagacttgacc
ccagcttcggccgggctcccggcatccccaggtttggaggaagaggcgctacaacagcag
agtcctctgagccaggccagggagctggaggctgagctcccagagcaaggccaggtggcc
cacggcaccaatggcattcacgtcaccggcgggtctgtgactgtcaccggcaacatctac
atctacaacgggccagtactggggggagcacggggccccggagacacccccgctccccca
gagcctccgtaccccatccctgaagagggtgcccctagccctcccgggctctccacaccc
taccaggaggatggcaaagcttggcacctggctgagacagagacactggggtgccacacc
ccctaa

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