Phocoena sinus (vaquita): 116760930
Help
Entry
116760930 CDS
T07759
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116760930 (NUP107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116760930 (NUP107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116760930 (NUP107)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116760930 (NUP107)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116760930 (NUP107)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116760930 (NUP107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF2310
DOCK_C-D_N
HisK_sensor
Motif
Other DBs
NCBI-GeneID:
116760930
NCBI-ProteinID:
XP_032502367
Ensembl:
ENSPSNG00000004735
UniProt:
A0A8C9BHJ9
LinkDB
All DBs
Position
10:complement(48617760..48662884)
Genome browser
AA seq
926 aa
AA seq
DB search
MDRSGFGEMASPVIREAEVTRTARKQSAQKRVLIRASQDEIFANTTPRNQVIPRTPSSLR
QPLVTPTNRSLLRQPDVFCILGTGGRSPRLPQSSGFLGNLSMVTNLDDSNWAAAFSSQRA
GLFTNTEPHSVTEDVTLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYEN
ICSSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEDESM
FVITVLNASEKAVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWEN
TLHTLKQRQLSSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMT
EEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEHVEGNPYRCIWKISCWRMAEDEL
FNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVITLDETEELP
REYLEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSR
NNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLINEKHTNLIAFYTCHLPQD
LAVAQYALFLEGVTEFEQRHHCLELAKEADLDIATITKTVVENIRKKDNGEFSHHDLAPA
LDTGTTEEDRLKIDVIDWLVFDPSQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDS
IAEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLTPQ
ATFTEKVAHEHKEKKYEMDYGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEED
HERTYQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRK
LLQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtggctttggagagatggcatctcctgtgatccgggaggcagaggtgact
cggactgcacgaaaacagagtgctcaaaaaagagttttaattcgggcatcccaagatgaa
atttttgctaatactacaccaagaaaccaggttatcccgcgaactcccagctcacttaga
caacctttagttactccaacaaaccgaagcttactaaggcagccagatgttttctgcatt
cttggaactggagggaggtctcctcggcttccacagtcttcagggttcttgggaaatctg
tctatggtaactaatctggatgacagtaattgggccgctgcattctcatcacagcgtgca
gggctcttcacaaacacagagccccacagtgtaacagaggatgtaactctcagtgctgtt
atgttacgggaggacgatcctggagaagctgcatccatgagtatgttttctgatttcctg
cagtcttttttgaagcactcttcaactacagtttttgaccttgtggaagagtatgaaaac
atttgtagtagtcaggtgaatatactgagtaaaatagtgagccgagcaacacctggactt
caaaagttttcaaaaacagccagtatgctctggcttcttcaacaggagatggtcacatgg
aggctgctggcttctttgtatagagacagaatacagtctgcattagaagatgaaagtatg
tttgtaattactgttcttaatgccagtgaaaaagcagttgtggaagcattatttcagaga
gattcacttgtccgacaaagtcagctggtggtagattggttggagagcattgccaaagat
gagatcggagatttttcggataatattgagttttatgcaaagtcagtatattgggaaaat
actctgcataccttgaaacagcggcagctctcttcttacataggaagtgtccgtcctctt
gtcactgaattggaccctgatgctcccataagacagaagatgccccttgatgatctggat
agagaagatgaagtcagattacttaaataccttttcactctgattcgtgctggaatgaca
gaagaggcacaacgactctgcaaacgctgtggtcaggcatggagagctgcaacacttgaa
ggctggaagctctatcatgaccccaatgttaatggaggaacagaattagaacatgttgaa
gggaatccatatagatgcatttggaaaataagttgttggagaatggcggaagatgagctt
tttaatagatatgagagagcaatttatgcagctttaagtgggaatctcaagcagctgctt
cctgtctgtgacacctgggaagacacagtgtgggcctactttcgggtgatggtggacagt
ctggtagaacaggagatccggacatcagtaataactctagatgaaactgaagaactccct
agagaatatttggaggcaaattggactttagaaaaggtttttgaagaacttcaagctact
gataaaaagagagttctggaagagaatcaagaacattatcatatagttcaaaaattcctt
atcctgggagacattgatggtctgatggatgaatttagcaaatggctttccaaaagcaga
aacaatctacctggacacctccttcgcttcatgactcacctcattttgtttttccgcact
ctgggactacagaccaaagaagaagtttccattgaagttttaaagacatacatacagctt
ttaataaatgagaaacatacaaatctcatagcattttatacctgtcatttgcctcaagac
ctcgctgttgcccagtatgcattatttttggaaggtgttacagaatttgaacagcgccac
cattgcctggagctggctaaagaagcagatttggatattgcaactataacaaaaaccgta
gttgagaatattcggaagaaagataatggtgaattcagtcatcatgacctggccccagcc
ctagatactggcactactgaggaggaccgtttaaaaatcgatgtaattgactggttggta
tttgacccatcacagagggcggaagcactaaaacaaggcaatgccataatgaggaaattc
ttggcatcaaaaaagcacgaagctgcaaaagaagtatttgtgaaaattcctcaggattca
atagcagaaatctataaccagtgggaggagcaaggaatggagagcccacttcctgctgaa
gatgataacgctatccgagaacacttgtgcattagagcttacttggaagcccatgaaacc
tttaatgagtggtttaagcatatgaattcagctccacaaaaacctactttgacacctcaa
gcaacttttactgagaaagtggctcatgaacacaaagaaaagaaatatgaaatggattat
ggtatttggaaagggcatttggatgccctaactgctgatgtgaaggagaaaatgtacaat
gtcttgttgtttgttgacggagggtggatggtggatgttagagaggatgctgaggaagac
catgaaagaacatatcaaatggttttactgagaaagctttgtctgccaatgttgtgtttt
ctgcttcacaccatattgcatagtaccggtcagtatcaggaatgcctgcagttagcggat
atggtatcctctgagcgccacaagctgtatctggtgttttctaaggaagaactaaggaaa
ttgctacagaagttaagagaatcctctctaatgctcctagaccagggacttgatccatta
ggatatgaaattcagtcataa
DBGET
integrated database retrieval system
