Phocoena sinus (vaquita): 116760967
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Entry
116760967 CDS
T07759
Symbol
POU6F1
Name
(RefSeq) POU domain, class 6, transcription factor 1
KO
K09368
POU domain transcription factor, class 6
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116760967 (POU6F1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116760967 (POU6F1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116760967
NCBI-ProteinID:
XP_032502482
Ensembl:
ENSPSNG00000008493
UniProt:
A0A8C9BTV3
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Position
10:62690688..62718561
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AA seq
605 aa
AA seq
DB search
MDPGAGPDSSLTVNEQVIVMSGHETIRVLEVGVDAQIPAEEEGKALEGVAAEGSQSGGPT
KASEAAGEAGPDNPDSSAEATVKSLPGMPPSPAPAVATFSQAPCQPQASQTLTPLAVQAA
PQVLTQENLATVLTGVMVPAGAVTQPLLIPISIAGQVAGQQGLAVWTIPTATVAALPGLT
AASPTGGVFKPPLAGLQAAAVLNAALPAPVQAAPPAQASSPTRPQTLIQTQPLLQTTPAI
LPQSTAATATAPTPKPVDSPPQITVQPAGFAFSPGIISAASLGGQTQILGSLTATPVIAN
AVPSMPGISSQILTNAQGQVIGTLPWVVNSASMAAPAPAQSLQVQAVTPQLLLNAQGQVI
AALASSPLPSPVAVRKPSTPESPAKSEVQPIQPPAAMPQPAVVIASPAPAAKPAASAPIP
ITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATE
GPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRK
RRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLN
VFQIP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggagccgggccagactcatctctgactgtcaatgagcaggtcatcgtgatg
tcaggccatgagaccatccgagttctggaggttggagtggatgcccagatccctgctgag
gaggagggcaaagcactggaaggtgtggccgccgagggctcccagagcggaggccccacc
aaagccagtgaagctgctggtgaagctgggccagacaacccagactcctccgcagaggca
actgtgaagtcactcccggggatgcctccgagccctgcccctgccgttgccaccttcagc
caagccccatgccagcctcaggcatcgcagaccctgacgccactggctgtacaagctgcc
ccccaggtcttgactcaggaaaacttagccacagttctgacaggagttatggttccagca
ggggcagttactcaacctcttcttatccccatcagtattgcaggtcaagtggctggtcag
caggggctggccgtgtggacaattcctacagcaaccgtggctgccctcccaggactgacc
gctgcttctcccacggggggagttttcaagccacctttagccggtctccaagcagctgcc
gtgctgaacgccgctctcccggcacctgtacaagctgccccaccggcccaggcctcctcg
cccacccggccccagacgctgatccagacccagccgctgctgcagaccacacctgccatt
ctgccgcagtccactgctgccaccgcgactgcccccacccccaagccagtggacagcccc
ccacagatcaccgttcagcctgcaggcttcgcgtttagcccaggaatcatcagtgctgct
tccctcgggggacagacccagatcctgggctccctcactgcaactccggtcattgccaac
gccgttcccagcatgccggggatcagcagtcagatcctcaccaacgctcagggacaggtt
attggaacacttccgtgggtagtgaactcggctagcatggcggccccagcaccagcccaa
agcctgcaggtccaggctgtgaccccccagctgttgttgaacgcccagggccaggtgatc
gcagccctggccagcagccccctgccttctcccgtggctgtccggaagcccagcactcct
gagtcccccgctaagagtgaggtgcagcccatccagcccccggcagccatgccccagcca
gctgtggtcatcgccagcccagccccagcggccaagccagctgcctctgctcctatcccg
atcacctgctcagagacccctactgtcagccagctggtgtccaagccacatactccgagt
ctggatgaggacgggatcaacttagaagagatccgggagtttgccaagaactttaagatc
cggcggctatccctgggcctcacgcagacccaggtgggtcaggctctgaccgcgacggaa
ggcccagcctacagccagtcagccatctgccggtttgagaagctggacatcacgcccaag
agtgcgcagaagttgaagccagtgctggagaagtggctgaatgaagccgaactccggaac
caggaaggccagcagaacctgatggaatttgtgggaggcgagccctccaagaaacgcaag
cgccgcacctcctttaccccccaggccatagaggctcttaacgcctacttcgagaagaac
ccgctgcccacaggccaggagatcaccgagattgctaaggagctcaactatgaccgggag
gtcgtgcgggtctggttctgcaaccggcgtcagacgctcaagaacaccagcaagctgaat
gtctttcagatcccttag
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