KEGG   Phocoena sinus (vaquita): 116760984
Entry
116760984         CDS       T07759                                 
Symbol
TSPO
Name
(RefSeq) translocator protein isoform X1
  KO
K05770  translocator protein
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04080  Neuroactive ligand-receptor interaction
psiu04979  Cholesterol metabolism
psiu05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    116760984 (TSPO)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    116760984 (TSPO)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116760984 (TSPO)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:psiu02000]
    116760984 (TSPO)
Transporters [BR:psiu02000]
 Other transporters
  Others
   116760984 (TSPO)
SSDB
Motif
Pfam: TspO_MBR
Other DBs
NCBI-GeneID: 116760984
NCBI-ProteinID: XP_032502505
Ensembl: ENSPSNG00000004291
LinkDB
Position
10:complement(6156352..6168003)
AA seq 183 aa
MCGKELSGTAAAAAMAPPWVAAVGFTLVPSLGGFLGSHYIREESLRWYAGLQKPLWHPPR
WTLAPIWGTLYSAMGYGSYMIWKELGGFSKEAVVPLGLYAGQLALNWAWPPLFFGARQMG
WALVDLLLMGGVAAATAVVWHQVSPPAACLLYPYLAWLAFAATLNYCVWRDNQDHSRGRR
LSE
NT seq 552 nt   +upstreamnt  +downstreamnt
atgtgtggaaaagaactttccggaacagcagctgcagcagcaatggccccgccctgggtg
gccgccgtgggcttcacgctggtgcccagtctggggggcttcctgggctcccactatatc
cgcgaggagagtctccgctggtacgccggcctgcagaagcccttgtggcacccgccccgc
tggacgctggctcccatctggggcacgctgtactcggccatggggtatggctcctacatg
atctggaaagagctggggggcttctcgaaggaggctgtggttcccctgggcctctacgct
gggcagctggctctgaactgggcatggccccccctcttcttcggtgcccgacaaatgggt
tgggccctggtggacctcctgctgatgggtggagtggcggcagccacggccgtggtctgg
caccaggtgagcccaccggccgcctgcctgctctacccgtacctggcctggctggccttt
gcggccacgctcaactactgcgtctggcgggacaaccaggaccacagccgtggccgtcgg
ctctcggaatga

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