Phocoena sinus (vaquita): 116760984
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Entry
116760984 CDS
T07759
Symbol
TSPO
Name
(RefSeq) translocator protein isoform X1
KO
K05770
translocator protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04979
Cholesterol metabolism
psiu05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116760984 (TSPO)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
116760984 (TSPO)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
116760984 (TSPO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116760984 (TSPO)
Transporters [BR:
psiu02000
]
Other transporters
Others
116760984 (TSPO)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TspO_MBR
Motif
Other DBs
NCBI-GeneID:
116760984
NCBI-ProteinID:
XP_032502505
Ensembl:
ENSPSNG00000004291
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Position
10:complement(6156352..6168003)
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AA seq
183 aa
AA seq
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MCGKELSGTAAAAAMAPPWVAAVGFTLVPSLGGFLGSHYIREESLRWYAGLQKPLWHPPR
WTLAPIWGTLYSAMGYGSYMIWKELGGFSKEAVVPLGLYAGQLALNWAWPPLFFGARQMG
WALVDLLLMGGVAAATAVVWHQVSPPAACLLYPYLAWLAFAATLNYCVWRDNQDHSRGRR
LSE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaaaagaactttccggaacagcagctgcagcagcaatggccccgccctgggtg
gccgccgtgggcttcacgctggtgcccagtctggggggcttcctgggctcccactatatc
cgcgaggagagtctccgctggtacgccggcctgcagaagcccttgtggcacccgccccgc
tggacgctggctcccatctggggcacgctgtactcggccatggggtatggctcctacatg
atctggaaagagctggggggcttctcgaaggaggctgtggttcccctgggcctctacgct
gggcagctggctctgaactgggcatggccccccctcttcttcggtgcccgacaaatgggt
tgggccctggtggacctcctgctgatgggtggagtggcggcagccacggccgtggtctgg
caccaggtgagcccaccggccgcctgcctgctctacccgtacctggcctggctggccttt
gcggccacgctcaactactgcgtctggcgggacaaccaggaccacagccgtggccgtcgg
ctctcggaatga
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