Phocoena sinus (vaquita): 116761069
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Entry
116761069 CDS
T07759
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04082
Neuroactive ligand signaling
psiu04721
Synaptic vesicle cycle
psiu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116761069 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116761069 (SLC6A12)
04721 Synaptic vesicle cycle
116761069 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116761069 (SLC6A12)
Transporters [BR:
psiu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116761069 (SLC6A12)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116761069
NCBI-ProteinID:
XP_032502668
Ensembl:
ENSPSNG00000011012
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Position
10:complement(100081229..100102950)
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AA seq
617 aa
AA seq
DB search
MAADDRKVAVPKDGPSVVSWVPEEGEKLDQEGKDQVKDRGQWSNKMEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFFPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQG
IGLASVVIEAYLNVYYIIILSWALFYLFSSFTSELPWTACTHSWNTEHCMDFLNRSAAGT
AAPPVNFTSPVMEFWERRVLGISSGIHDLGALRWELALCLLLAWVVCYFCIWKGVKSTGK
VVYFTATFPYLMLAILLIRGITLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAI
CQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVAE
SGPGLAFIAFPKAVSMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASVDMFPRQLRK
SGRRELLILAIVVLCYLIGLFLVTEGGMYIFQLFDYYACSGACLLFLSVFEVLCVGWVYG
ADRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLRYNNVYVYPAWGYF
IGWLLAGSSMSCIPLFIVVALLKTQGSFRKRLRQLVTPDPSLPQPKRHLCLDGGSGRDCG
PSPTKAGLMAGEKETHL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgacagaaaagtggcagttcccaaggatgggccttctgtggtctcctgg
gtccctgaggagggagagaagttggaccaggagggcaaggaccaggtgaaggatcggggc
cagtggagcaacaagatggagttcgtgctgtccgtggccggggagatcattgggctgggc
aacgtctggaggtttccctacctctgctacaaaaacgggggaggagccttcttcttcccc
tacttcatcttcttcttcacctgcggcatcccagtgttctttctggaagtggcgttgggc
cagtacaccagccagggcagcgtcacagcctggaggaagatctgccccctcctccagggc
attggcctggcgtctgtggtcatcgaggcctatctgaacgtctactacatcatcatcctc
tcctgggccctcttctacctgttcagctcctttacctccgagctgccctggactgcctgc
acccactcctggaacacagagcactgcatggacttcctgaaccgctcggcagctggcaca
gcggccccgcccgtgaacttcacctcccccgtcatggaattctgggagagacgtgttctg
ggcatcagctccggcatccacgacctgggggccctgcgttgggagctggccctctgcctc
ctgcttgcctgggtcgtctgctacttctgcatctggaagggggtcaagtccacgggcaag
gttgtctacttcacagccacattcccctacctgatgctggccatcctactgatccgaggc
atcaccctgcccggagcctacgagggcatcatctactatctaaaaccagatttgcttcgg
ctcaaggacccccaggtgtggatggacgcaggcacccagatcttcttctccttcgccatc
tgccaggggtgcctgacggccctgggcagctacaacaagtaccacaacaactgttacagg
gacagcatcgccctctgcttcctgaacagcgccaccagcttcgtggccgggtttgtggtc
ttctccatcctgggcttcatgtcccaggagcagggggtgcccatctctgaggtggccgag
tcaggccctggtctggccttcattgccttccccaaggctgtgagcatgatgcccctgtcc
cagctgtggtcctgcctcttcttcatcatgctcatcttcctcgggctggacagccagttt
gtctgtgtggagtgcctggtgacagcctccgtggacatgttccccaggcagctccggaag
agcgggcggcgggagctcctgatccttgccatcgtggtcctgtgctacctgatcgggctc
ttcctggtcaccgagggcgggatgtacatcttccagctgtttgattattacgcctgcagt
ggcgcgtgcctgctgttcctttccgtgtttgaagtgctctgcgtcggctgggtgtacggg
gccgaccgtttctatgacaacgtggaggacatgattggctaccggccgtggcccctagtg
aagatctcctggctcttcctgaccccgggcctttgcctggccactttcctcttctccttg
agcaagtacacacctctcagatacaacaacgtctatgtgtacccggcctggggatacttc
atcggctggctcctggctggctcctccatgagctgcatcccacttttcatcgtcgtcgcc
ctcctgaagacccagggttccttcaggaagcgcctgcggcagctcgtcacccctgacccc
agcctgccacagcccaagcgacacctgtgtctggacggtggcagcggccgggactgcggg
ccttccccaacgaaggcgggtctcatggccggggagaaggagacgcacttgtag
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