Phocoena sinus (vaquita): 116761077
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Entry
116761077 CDS
T07759
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116761077 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116761077 (PRPF3)
Spliceosome [BR:
psiu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116761077 (PRPF3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
116761077
NCBI-ProteinID:
XP_032502693
Ensembl:
ENSPSNG00000001838
UniProt:
A0A8C9BE61
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Position
1:109846151..109865495
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AA seq
683 aa
AA seq
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MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDVPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtctaagagggagctggatgagctgaaaccatggatagagaagacagtgaag
agggtgctgggtttctcagagcccacagtggtcacagcagcactgaactgtgtggggaag
ggcatggacaagaagaaggcagctgaccacctgaaaccttttcttgatgattctactctc
cgatttgtggacaaactgtttgaggctgtggaggaaggccgaagctctaggcattccaag
tccagcagtgacaggagcagaaaacgagagctaaaggaagtgtttggtgatgactctgag
atctccaaggaatcatcaggagtaaaaaagcgacggataccccgttttgaggaggtggaa
gaggagccagaagtaatccctgggcctccctcagagagtcctggcatgctgactaagctc
cagatcaaacagatgatggaggcagcaacacggcaaatcgaggaaaggaaaaaacaacta
agtttcattagcccccctacgcctcagccaaagactccttcttcctcccaaccagagcga
cttccaattggcaacactattcagccctcccaggccgccactttcatgaatgatgccatt
gagaaggcaaggaaagcagctgaactacaagcccgcatccaagcccagctggcactgaag
ccagggctcatcggcaatgctaacatggtgggcctggccaatctccatgctatgggcatt
gctcccccgaaggtggagttaaaagatcaaactaaacctacaccactgattcttgatgaa
caaggtcgaactgtagatgcaaccggcaaggaaattgagctgacacaccgtatgcctact
ctgaaggccaatattcgggctgtgaagagggaacaattcaagcaacagctaaaagaaaag
ccatcagaagacatggagtctaataccttttttgacccccgagtctcaattgccccttcc
cagcgccagagacgcacttttaaattccacgataagggcaaatttgaaaagattgcccag
cgattacggacaaaggctcaactggagaagctgcaggcagagatctcacaggcagctcga
aaaacaggcattcatacttcaactaggctggccctcattgctcctaagaaggagttgaag
gaaggtgatgtccctgaaattgagtggtgggactcttatatcatccccaatggctttgac
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
ccagcccagctcaaccctccagtcgacaatgacacaccagttactctgggggtatatctg
accaagaaggaacagaagaaacttcgaaggcaaacaaggagggaagcacagaaggagcta
caagagaaagtcaggctaggcctgatgcctcctccagaacccaaagtaagaatttcaaat
ttgatgcgagtattaggaacagaagctgttcaagaccccacgaaggtagaagcccatgtc
agagctcagatggcaaaaagacagaaagcgcatgaagaggccaacgctgcccgaaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtacacatatctgtttatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcagctgtacctgacaggggtggtggtactgcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggcccagaagaaatttaagcgtcttatgctgcat
cggataaagtgggatgaacagacatctaacacaaagggagatgatgatgaggaatctgat
gaggaagctgtgaagaaaaccaacaaatgtgtactagtctgggagggtacagccaaagac
cggagctttggggagatgaagttcaaacagtgccctacagagaacatggctcgggagcat
ttcaaaaagcatggggctgagcactactgggaccttgcgctgagtgaatctgtgttggag
tccaccgactga
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