Phocoena sinus (vaquita): 116761101
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Entry
116761101 CDS
T07759
Symbol
SNX27
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116761101 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116761101 (SNX27)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Others
Others
116761101 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116761101 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
RBD
RA_3
SNX17-31_F2_FERM
DarA_N
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116761101
NCBI-ProteinID:
XP_032502760
Ensembl:
ENSPSNG00000000477
UniProt:
A0A8C9B4M8
LinkDB
All DBs
Position
1:110902289..110987312
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AA seq
544 aa
AA seq
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MADEDGEGIHPSAPHRNGGGGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNV
RGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQV
VDLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNG
EKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRR
GLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTT
DQVYQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTI
RKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNM
LRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRW
DTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQR
DVAT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggacggggaagggattcacccctcagcccctcacaggaacggaggtggc
ggcggcggcggcggcggtggggggtctgggctccactgcgccgggaacggcggcggggga
ggcggcggcccgcgggttgtgcgcatcgtcaagtccgagtccggctacggcttcaacgtg
cggggccaagtgagcgagggcgggcaactgcggagcatcaacggggagctgtacgcgccg
ctgcagcatgtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaag
ggggaccgcattctggaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtg
gtggacctgatccgagcaggcgagaaggaattgatcttgacagtgttatcggtacctcct
catgaggcagataacctagatcccagtgacgactcgttgggacagtcattttatgattac
acagaaaagcaagcagtgcccatatcggtccccacatacaaacatgtggagcagaatggt
gagaagtttgtggtatacaatgtttacatggcagggaggcagttgtgttctaagcggtac
cgggaatttgccatcctacaccagaacctgaagagagagtttgccaactttacatttccc
cgacttccagggaagtggccattctctttatcagaacagcaattagatgcccgacgtcga
gggttggaagaatatctagaaaaagtgtgctcaatacgagtcattggtgagagtgacatc
atgcaggaattcctatcagaatcagatgagaactacaatggtgtgtctgacgtagagctg
agagtagcattaccagatggaacaacagttacagtcagggttaaaaagaacagtactaca
gaccaagtatatcaggctattgcagcaaaggttggcatggacagtacgacagtgaattac
tttgccttatttgaagtgatcaatcattcctttgtacgtaagctggcacctaatgaattt
cctcataaactctacgtccagaattacacatcagctgtgccaggcacctgcctaaccatt
cgaaagtggctttttacgacagaagaagaaatcctcttaaatgacaatgaccttgctgtt
acctacttctttcatcaggctgttgatgatgtgaaaaaaggttacatcaaagcagaggaa
aaatcctaccaattacagaagctgtatgaacaaaggaaaatggtcatgtacctcaacatg
ctaaggacttgtgagggctacaatgaaatcatcttcccccactgtgcctgcgactccagg
agaaaggggcatgttatcacagccatcagcatcacgcactttaaactgcatgcctgcact
gaagaaggacagctggagaaccaggtaatagcatttgaatgggatgagatgcaacgatgg
gatacagatgaagaaggaatggccttctgttttgaatatgctcgaggagagaagaagcct
cgatgggttaaaatcttcacaccatatttcaattacatgcatgaatgcttcgagagggtg
ttctgcgagctcaagtggagaaaagagaacattttccagatggcgaggtcacagcagaga
gatgtggccacctag
DBGET
integrated database retrieval system
