Phocoena sinus (vaquita): 116761532
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Entry
116761532 CDS
T07759
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116761532 (CARMIL1)
Membrane trafficking [BR:
psiu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116761532 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
116761532
NCBI-ProteinID:
XP_032503246
Ensembl:
ENSPSNG00000006252
LinkDB
All DBs
Position
11:complement(83455895..83779624)
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AA seq
1422 aa
AA seq
DB search
MTEESSEVPRELIESIKDVIGRKIKIALKKKVKLEVKGDKVENKVLVLTSCRAFLVTARI
PTKLEVTFSYLEIHGVLCSKPTQMVVETEKCSISLKMASPEDVSEVLAHIGTSLRKIFPG
FSPLRIMKKVCMEPSERLASLQALWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANLLTATTLNHLDLSGNILRGDDLSSMYSF
LAQPNAIAHLDLSNTECSLDMVCGALLRGCLQYLAVLNLSRTVFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLSPEPLKALLLGLACNHNLKRVSLDLSNCELRSGGAQVLEGCIAE
IHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKNEVTIIINALGSNTSLTTVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAVQEDLKSA
ERLMRDAKNSKTLLPNLYHVGGASWAGASGLLSSPIQETLESMAGEVTRVVDEQLKALLE
SMVDAAENLCPNVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILDALSHCHHKLADHFSRRGKALPQQDSLEIELPEEKPVKRSIIMVEE
LTEIERLEDLDTCMMTPKSKRKTIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPS
IRQEKQSSGFISDLPSEEGKKLEHFTKLRPKRTKKQQSTHAAGCATSLVSQDGEQNGLMG
RVDEGVDEFFTKKVTKMDSKRGSARGSESHELSEGGDEKKKRDFRKSGFLNLIKPRTKPE
RSPTVLMTEELSCPKAGVRSPAVDTPRKDTKPAEHNGSADRVEEIKTPDSLEESQGEDVG
KVDRSESKGSPQGGRRYRVQMMGSGLLAEMKAKQEMKAKAACSLKKLGNDAISQDSSSLA
LSSTERLDGGGAVPKVHPENRFGLGTPEKNTKAELKVEAGSRSRSFSSRPTSPKPLLQSP
KPSLSVRPTIPQKPRTASRPEDIPDSPSSPDSPKVALLPPVLKKVPSDKERDSQGSPQPS
PRTFSREVVQRGDYYKRHSDHDSGKPSSRGKRPSKLYSTIAEEEVNAIGHRRSQPTNVSR
RSWGQQAQECQEQKQWSSSKDGQQGSKSSDSGEEAEKEFIFV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagagctccgaggtgcccagggaattgatagaaagcataaaggatgttatt
ggcagaaagataaagattgcattgaagaagaaagtaaaattggaagtgaagggagacaaa
gttgaaaacaaagtgctggtgcttacatcatgccgagccttccttgtcacagcacgaatc
cccaccaagctcgaggtaaccttcagctacctggagattcacggtgtcctgtgcagcaag
ccaactcagatggttgtggaaactgagaagtgcagcatctccctgaagatggcatcacct
gaggatgtgagtgaggtgctggcgcacatcggcaccagcctgcggaagatcttccctggc
ttctccccattgagaatcatgaaaaaagtctgcatggagccatctgagcgactggccagt
ctccaggctctgtgggacagccagactgtggccgagcagggcccctgtggtggattttct
cagatgtatgcctgtgtttgtgactggcttggattttcatacagggaagaagtacaatgg
gatgtggatacaatttatctgacacaagacaccagggaattgaatttacaagacttcagt
catcttgaccacagggacctaatacctatcattgctgctctggaatacaatcagtggttc
actaagttgtcctctaaggatctaaaactgtccactgatgtctgtgaacagatcttgagg
gtggtgagtaggtccaatcgactggaagaactggtgttggaaaacgctggacttagaaca
gattttgcacaaaaactggccagtgctctagcacataatcccaactcaggactccatacg
attaaccttgctggcaacccactggaggatcgaggtgtgtcgtctttaagtattcagttt
gccaaactcccaaagggattaaagcatttaaatttatctaaaacctcattgtcacctaaa
ggggtgaatagcctttctcagtcactcagtgccaacctgttgaccgccaccactcttaac
catctggacctctcagggaacatccttcgcggagatgacctctcgtccatgtacagtttt
ttggcccagccaaatgccattgctcatctggatttgtccaatacagaatgttccctggac
atggtctgtggagctcttctccgtggctgccttcagtatttagctgtgctcaatctctcc
agaactgtcttttctcaccggaaaggaaaagaagtacccccatctttcaagcagtttttt
agtagttctctggctctgatgcaaatcaacctttcaggcacaaaactgtctcctgagccc
ttaaaagcgctgttattgggcctggcttgtaatcataacttgaagagagtttctcttgat
ctcagcaactgtgagctgagatctggaggtgcgcaggtattagaaggctgcatcgccgaa
atccacaacatcactagcctagacatctccgataatggtttagaatctgacctatctacc
ttaatagtgtggctcagtaaaaacagatccatacaacacctggcgttaggcaaaaatttt
aataatatgaaatccaaaaatctgacacctgtgttggacaacttagtacagatgattcaa
gatgaagaatcacctctgcagtccttgtccctggctgactcgaaactcaagaacgaggtc
accatcatcatcaatgccctgggaagcaacacctccctgaccacagtggacatcagtggg
aatggcatgggggacatgggggcaaagatgctggccaaagcgctgcagatcaacaccaag
ctcaggactgttatatgggacaagaacaacattactgcccaaggctttcaagatatagct
gttgctatggaaaagaactacacgttgagatttatgccaattcctatgtatgatgcttct
caagccttaaaaacaaaccctgaaaaaacagaagaggctctgcagaagatagaaaactat
ctgctccggaatcacgagactagaaaataccttcaagagcaggcctaccgcctacagcag
ggcattgtcaccagcaccacgcagcagatgattgacagaatatgtgtgaaagtacaagat
catctcaactctttacgaaactgtgggggagatgctgtccaggaagatctaaaatcagca
gaaaggctcatgcgtgatgcgaagaactctaaaacgttgttaccaaatttataccacgtt
ggtggtgcatcttgggcgggagccagtggcttgttatccagtccaattcaggagaccctg
gaatcaatggccggagaagttacgagagttgtagatgaacaactcaaggcgttgcttgag
tccatggttgatgctgccgagaatctttgtcccaatgtgatgaaaaaagcccacattcgg
caagacctgattcatgccagcactgaaaagatttccatcccacgtacctttgttaaaaat
gtcctgttggagcagtctggaattgatatccttaacaaaattagtgaagtgaagttgaca
gtggcctccttcctatctgaccgaatcgtggatgaaattctggatgcactttcacactgc
catcacaaactggccgaccatttcagcagacgtggcaaggcccttcctcagcaagattcc
ttggagatcgagctgcctgaggagaagcccgttaaacgctccatcatcatggtggaggag
ctcacagagatagaacgtttggaagatctggatacttgtatgatgactcctaaatccaaa
aggaagactatccatagccgaatgctgcggcctgtttccagggcatttgaaatggaattt
gaccttgataaagccctggaagaagtgccaattcacattgaagacccgcctttcccatcc
atcagacaagagaagcagagctcagggttcatctctgacttgccgtccgaggaaggaaag
aagctggagcactttaccaagttaagaccaaaacggactaagaagcaacagtccacgcac
gcagcgggctgtgctaccagcctagtctcccaagatggtgaacagaatggtcttatgggg
agagtggatgaaggtgtagatgaatttttcaccaagaaggtgaccaaaatggattccaag
agagggtcagcaagaggctcagagtcccatgagcttagtgaaggaggagacgagaagaaa
aagcgagactttcggaaaagtggctttctcaacttaatcaaaccccggaccaagcctgag
cggtcaccaacggtcttgatgacagaagaactctcctgtccaaaggcaggagtcagaagt
ccagctgtggacacccccaggaaggacacgaagccagccgagcacaatggcagtgctgat
cgggtagaggagatcaaaacacctgactccctagaagaaagtcaaggggaagacgtgggg
aaggtggaccggagtgagagcaagggcagcccccaaggagggcgaaggtacagggtccaa
atgatgggcagtgggctgctggcggagatgaaggccaagcaggagatgaaagccaaggct
gcttgctcactgaagaaacttggaaatgatgccatctcccaggattcttccagcctggcc
ttgagcagcacagaacggttggatggaggtggggcagtgcctaaagtacatccagagaac
cgcttcggtttgggaacaccagaaaagaacaccaaagcagagctcaaggtggaggcaggc
tccaggtcccggagcttttccagcaggcccaccagcccgaagcccctcctgcagtccccc
aaacccagcctgtcggtgcggcccaccatcccgcagaaaccgagaaccgcctcgcggcct
gaggacatcccagactctccatccagcccggattcccctaaagtcgctcttcttccgcct
gtcctgaaaaaggttccttcggacaaggagagagatagccagggcagcccacagcccagt
cccaggacgttttcccgggaagtagtgcaaagaggagattattacaaaaggcattcagat
catgacagtggcaagccttccagtagagggaaaagaccttcaaaactgtactccaccatt
gcagaagaggaagtgaatgcaattgggcacaggaggtcacagccaacaaatgtgtccagg
agaagctggggccagcaggcccaggagtgtcaagaacaaaagcagtggtcctccagtaaa
gatggccagcaaggcagcaaatccagtgactctggggaagaagcagaaaaagagtttatt
tttgtgtaa
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