Phocoena sinus (vaquita): 116761548
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Entry
116761548 CDS
T07759
Symbol
RPUSD3
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116761548 (RPUSD3)
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116761548 (RPUSD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
116761548
NCBI-ProteinID:
XP_032503297
Ensembl:
ENSPSNG00000017775
UniProt:
A0A8C9CM25
LinkDB
All DBs
Position
11:6978132..6985291
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AA seq
352 aa
AA seq
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MRTVLAPEMGGCRVLGQVWGGWRRGPGVRAARTASSFGTEARHQQQRRGSSKRSGPLDDQ
PFSGLLRPENVSREELVDVLRAAVVDQKGPLVTLNKPQGLPVTGKPGELTLLSVLPELSQ
SLGLGERELQVVRASGKETSGLVLLSSCPQTASRLQKFFTHSQRARRPTVTYCAVTDGIP
ATSEGKIQAALKLEHIDGVNLVVPVKSPSRKDILEGVKRTLSYFRVVAMGSGCALVQLQP
LTAFPSQLQAHMALQLCPLLGDHMYSARVATVLGQRFLLPAESTRPQRQVLDEALLRRLH
LTPSQAAQLPLHLHLHCLYLPGARPRDPPIKLLAPLPSYFSRTLHCLGLHYQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactgtcctcgctccggagatgggcggctgtcgtgttttgggccaggtctggggt
ggctggcggcggggtccgggggtccgcgcagcgcgcacagcctcaagttttggcaccgag
gcccggcatcagcagcaacgtcgaggctccagcaaacggtcggggcccctggatgaccag
cctttctcggggctgctgcggccagagaacgtcagtagggaggagctggttgatgtgctg
agggcagctgtggtggatcagaaaggacctctggtgacattgaacaagccacagggcctg
ccagtgacaggaaaaccaggagagctgacgttgctctcagtgctcccggagctgagccag
tccctggggctcggggagcgggagctccaggttgtccgagcatctgggaaggaaacctct
gggcttgtactcctctccagttgtccccagacagcaagccgcctccagaagttcttcact
cactcgcagagagccaggagacccacagtcacctactgtgctgtcactgatgggatccca
gctacttctgaggggaagatccaagcagctctgaaactggaacacattgatggggtcaat
cttgtagttccagtgaagtccccatcccgaaaggacatcttggaaggtgtcaagaggacc
ctcagctacttccgtgtggtggccatgggctctggctgtgccctggtccagctgcagcca
ctgacagcatttcccagccagctacaggcgcacatggcactacagctctgccctctgctc
ggggaccacatgtactctgcccgtgtggccactgttctgggccagcgctttctgctgcct
gctgagagcaccaggccccaaagacaggtcctggatgaagccctcctccgccgcctccac
ctgaccccctcccaggctgcccagctgcccctgcacctccacctgcattgtctctacctc
ccaggtgccaggcccagggacccacccatcaagcttctggcacctttgccctcttatttc
tccaggaccctgcattgcctggggctccactaccaatag
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