Phocoena sinus (vaquita): 116761602
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Entry
116761602 CDS
T07759
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
116761602 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116761602 (BHLHE40)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116761602 (BHLHE40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
116761602
NCBI-ProteinID:
XP_032503422
Ensembl:
ENSPSNG00000020577
UniProt:
A0A8C9CPU3
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Position
11:complement(11158411..11164635)
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AA seq
412 aa
AA seq
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MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTTRKPSDPGAKAMDFKEKPSSLAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKTELRVEQPYFKSDHGHRFTMGERIGAIKQESEEPPTKKSRMQLSDDEGH
FTSSDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALTSFMNPDKISAPLLMPQRLPSPLPAHPAIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagtgcgcaaccgccccccgcttgcctgcccaaagcgccaggactg
gagcccggagacctaccagggatggattttgcccatatgtaccaagtgtacaagtcgcgg
cggggaataaagcggagcgaggatagcaaggagacctacaaactgccgcaccgcctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctcccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtagttcttgaacttacc
ttgaagcatgtgaaagcactaacaaacctaattgatcagcaacagcagaaaatcattgcc
ctgcagagcggtttgcaagctggtgatctgtcggggagaaatgtcgaagcaggtcaagag
atgttctgctcaggtttccagacatgtgcccgggaggtgcttcagtacctggccaagcac
gagaacacccgggacctgaaatcttcccagctcgtcacccacctccaccgtgtggtctcc
gagctcctgcagggtggtaccaccaggaagccgtcagacccaggtgccaaagccatggac
ttcaaggagaaacccagctccctggccaaaggctctgaaggcccaggcaaaaactgtgta
ccggtcatccagcggactttcgctcactcgagcggcgagcagagtggcagtgacacggac
acagacagcggctacggaggagaatcagagaagactgagctgcgtgtcgagcagccgtac
ttcaaaagtgatcatggacacaggttcaccatgggagaaaggatcggtgctattaagcaa
gaatccgaagaaccccccacgaaaaagagcagaatgcagctctcagatgatgaaggccat
ttcactagcagtgacctgatcagctccccgttcctgggcccacacccgcaccagcctccc
ttttgcctgcccttctatctgatcccaccgtcagcgactgcctacttgcccatgctggag
aaatgctggtatcccacctctgtcccagtgttatacccaggcctcaacgcctctgccgca
gctctcaccagcttcatgaacccagacaagatctcagcccccttgctcatgccccagaga
ctcccttctcccttgccagcccatccggccatcgattcttccgccctgctccaagctctg
aagcagatcccccctttaaacttagaaaccaaagactaa
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