Phocoena sinus (vaquita): 116761744
Help
Entry
116761744 CDS
T07759
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03320
PPAR signaling pathway
psiu04659
Th17 cell differentiation
psiu04919
Thyroid hormone signaling pathway
psiu04920
Adipocytokine signaling pathway
psiu04928
Parathyroid hormone synthesis, secretion and action
psiu05200
Pathways in cancer
psiu05202
Transcriptional misregulation in cancer
psiu05207
Chemical carcinogenesis - receptor activation
psiu05216
Thyroid cancer
psiu05222
Small cell lung cancer
psiu05223
Non-small cell lung cancer
psiu05226
Gastric cancer
psiu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116761744 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116761744 (RXRB)
03320 PPAR signaling pathway
116761744 (RXRB)
04919 Thyroid hormone signaling pathway
116761744 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
116761744 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116761744 (RXRB)
05202 Transcriptional misregulation in cancer
116761744 (RXRB)
05207 Chemical carcinogenesis - receptor activation
116761744 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
116761744 (RXRB)
05216 Thyroid cancer
116761744 (RXRB)
05222 Small cell lung cancer
116761744 (RXRB)
05223 Non-small cell lung cancer
116761744 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116761744 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116761744 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116761744 (RXRB)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116761744 (RXRB)
Nuclear receptors [BR:
psiu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116761744 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
116761744
NCBI-ProteinID:
XP_032503817
Ensembl:
ENSPSNG00000020305
UniProt:
A0A8C9CU57
LinkDB
All DBs
Position
11:complement(63405248..63411995)
Genome browser
AA seq
539 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAVAAREQ
QTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAAPPSPPGPPLPPSAAASLGGSGA
PPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPED
VKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLT
YSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEE
MPVDRILEAELAVEQKSDQGVEGPGGTAGSGSSPNDPVTNICQAADKQLFTLVEWAKRIP
HFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFD
RSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETY
CKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcagcagcagcggcggcggcggcggtggcagccagagaacaa
caaaccccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgg
gactcccgaagcccagacagttcctctccaaatccccttccccagggggccgctccccct
tctcctccggggccacccttacccccttcagcagctgcatcccttggaggctctggggct
ccacccccacccccgatgccacccccgccactgggctcccccttcccggtcatcagctct
tccatggggtcccctggtctgccccctccagctcccccaggattctccgggcctgtcagc
agtccccagattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagat
gtgaagccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccct
ggggctggcaaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactacggg
gtttacagctgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacc
tactcgtgccgggacaacaaggactgcacggtggacaagcgccagcggaaccgctgtcag
tactgccgctatcagaagtgcctggccaccggcatgaagagggaggcggttcaggaggag
cgtcagcgggggaaggacaaggatggggatggggagggggctgggggagcccccgaggag
atgcccgtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggc
gttgagggtcctgggggaacggcgggtagcggcagcagcccaaatgatcctgtgactaac
atctgccaggcagctgacaaacagctcttcacacttgttgagtgggcaaagaggatccca
cacttttcctccttgcctctggatgaccaggtcatactgctacgggcaggctggaatgag
ctcctcattgcctccttctctcaccgatccatcgatgtccgagacggcatcctcctcgcc
acaggtcttcacgtgcaccgcaactcagcccattccgcaggcgtgggagccatctttgat
cggtccctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggac
aagacagaacttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctc
tccaaccccagcgaggtagaggtcctgcgggagaaagtgtacgcgtccctggagacctat
tgcaaacagaagtaccctgagcagcagggccggtttgccaagctgctcttgcgtcttcct
gctctcaggtccataggccttaagtgtctagagcatctgtttttcttcaagctcattggc
gacacccccatcgacaccttcctcatggagatgcttgaggctccccaccagctggcctga
DBGET
integrated database retrieval system
