Phocoena sinus (vaquita): 116761746
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Entry
116761746 CDS
T07759
Symbol
RING1
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116761746 (RING1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116761746 (RING1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116761746 (RING1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116761746 (RING1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116761746 (RING1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
116761746 (RING1)
Noncanonical PRC1 (PRC1.1)
116761746 (RING1)
Noncanonical PRC1 (PRC1.3/1.5)
116761746 (RING1)
Noncanonical PRC1 (PRC1.6)
116761746 (RING1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Sina_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116761746
NCBI-ProteinID:
XP_032503821
Ensembl:
ENSPSNG00000020433
UniProt:
A0A8C9CP83
LinkDB
All DBs
Position
11:63420413..63424501
Genome browser
AA seq
406 aa
AA seq
DB search
MTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAH
QDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEGEPGEGE
GDGEDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGAGGVGGGAGSEDSGDRGGTLG
GGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLA
LRIALERRQQQEAGEPGGPGGGASDAGGPDGGGGEGGGAGGGEGPEEPALPSLEGVSEKQ
YTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTKDPK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccggcgaatgcccagaatgccagcaaaacgtgggaactgagtctgtatgag
ctccaccggacccctcaggaagccatcatggatggcacagagattgcagtttcccctcgg
tcactgcattcagagctcatgtgccccatctgcctggacatgctgaagaatacgatgaca
accaaggagtgcctccaccgattctgctctgattgcattgtcacggccctgcgcagcggg
aacaaggagtgccctacctgccgaaagaagctggtatccaagcggtctctgcggccagac
cccaacttcgatgctctgatctctaagatctaccccagccgggaggaatatgaagcccac
caagacagggtgctcatccgcctcagccgcctgcacaaccagcaggcgctgagctccagc
attgaggaggggctgcgaatgcaggccatgcacagggcccagcgtgtgaggcggccgatg
cctgggtcagatcagaccacaacgatgagtgggggggaaggagagcctggggagggagag
ggggatggagaggatgtgagctcagactccgcccctgactctgccccaggccctgctccc
aagcgaccccgtggagggggcgcaggggggagcagtgtagggacagggggaggaggcgct
ggtggggtgggtgggggtgccggttctgaagactctggtgaccggggagggaccctggga
gggggaaccctgggccccccaagccctcccggggctcccagtcccccagagccaggtgga
gaaattgagctcgtgttccggccccaccccctgctcgtggagaagggagaatactgccag
actaggtatgtgaagacaactgggaatgccacagtggaccatctctccaagtacttggcc
ctgcgcattgccctggaacggaggcagcagcaagaggcgggggagccaggagggcctgga
gggggcgcctctgacgccggaggacctgatgggggaggtggggagggtgggggtgccgga
ggaggtgagggccctgaagagcctgccttgcccagtctggagggtgtcagcgaaaagcag
tataccatctacatcgcccccgggggcggagctttcacgacactgaatggctctctaacc
ctggagctggtgaatgagaagttctggaaagtgtcccgaccactggagctctgctatgcc
cccaccaaggatccaaagtga
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