Phocoena sinus (vaquita): 116761751
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Entry
116761751 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05134
Legionellosis
psiu05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116761751
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
116761751
09174 Infectious disease: parasitic
05140 Leishmaniasis
116761751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116761751
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116761751
03012 Translation factors [BR:
psiu03012
]
116761751
04131 Membrane trafficking [BR:
psiu04131
]
116761751
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116761751
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116761751
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116761751
Translation factors [BR:
psiu03012
]
Eukaryotic type
Elongation factors
116761751
Membrane trafficking [BR:
psiu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116761751
Exosome [BR:
psiu04147
]
Exosomal proteins
Proteins found in most exosomes
116761751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
116761751
NCBI-ProteinID:
XP_032503833
LinkDB
All DBs
Position
11:complement(67466429..67469721)
Genome browser
AA seq
470 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTTEKFEKESAKMGKGSFKYTWVL
DKLKAERKCGITTDISLWKFETSKYYVNIIDAPGHRDFIKNMITGTSQADCAVLIVAAGG
GESKAGISNNGQIREHALLAYTLGLKLXVNKMDSTEPPYSQKRYEETVKEVSTYIKKIGY
NPDTVAFVPISGWNGDNMLEPSANMLWFKGWKVTHKDGNASVTTMLETLDCILPPTCPTD
KPLPLPLQDVYKIGGTGTVPVGRVETGVLKPGMVLTFAPVNVTTEVKSAEMHHESFSEAL
RGDNVGFNVKNVSVKDVHRGNATGDSKNDPPTEAAGFPAQVIILNHPGQISGGYAPVLDY
HTAHIACKFAELKEKTDRRSGKKLEDGPKFLKSGDAAIIDMVPGKPMCVESFSDYPPPGH
FAVRDMRQTVAVGVIKAVDKKAAGGGKVTKSARKLRRLNEYYSQYLPPQS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagacccacatcaacatcgttgtcattggacacgtagattcggggaag
tctaccactactggccatctgatctacaaatgtggtgggatcgacaagagaaccactgaa
aagttcgagaaagagtctgccaagatgggaaagggctccttcaagtatacctgggtcttg
gacaaactgaaagctgaacgcaagtgtggtatcaccactgatatctccctatggaaattc
gagaccagcaagtactatgtgaacatcattgatgccccaggacacagagacttcatcaaa
aacatgattacaggcacatcccaggctgactgtgctgtcctgattgttgctgctggtggt
ggtgaatctaaagcaggtatttccaacaatgggcagattcgtgagcatgcccttctggcc
tacactctgggtctgaaactgnttgttaacaaaatggattccactgagccaccctacagc
cagaagagatatgaggaaactgttaaggaagtcagcacctatattaagaaaattggctac
aaccccgacacagtagcatttgtgccaatttctggctggaatggtgacaacatgctggag
ccaagtgctaacatgctgtggttcaagggatggaaagtcacccataaagatggcaatgcc
agtgtaaccacaatgcttgaaactctggattgcatcctgccaccaacttgcccaactgac
aagcccttgcctttgcccctccaggacgtctacaaaattggtggtactggcactgtccct
gtgggtcgagtggagactggtgttctcaaacctggcatggtgctcacctttgctccagtc
aatgtgacaactgaagtgaagtctgctgaaatgcaccatgaatctttcagtgaagccctt
cgtggggacaatgtgggcttcaatgtcaagaatgtgtctgtcaaagatgttcatcgtggc
aatgcaactggtgacagcaaaaatgacccaccgacagaagcagctggcttcccagctcag
gtgattatcttgaaccacccaggccaaatcagtggcggatatgcacctgtgctggattat
cacacagctcacattgcttgcaagtttgctgagctgaaggagaagactgatcgtcgttct
gggaaaaagctggaagatggccccaaattcttgaaatctggtgatgctgccatcattgat
atggttcccggcaaacccatgtgtgttgagagcttctctgactatcctcctccgggccat
tttgctgttcgtgacatgagacagacggttgctgtgggtgtcatcaaagcagtggacaag
aaggcagctggaggtggcaaggtcaccaagtctgccagaaagctcagaaggctaaatgaa
tattattcccaatacctgccaccccagtcttaa
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