KEGG   Phocoena sinus (vaquita): 116761813
Entry
116761813         CDS       T07759                                 
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
  KO
K11478  protein Jumonji
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03083  Polycomb repressive complex
psiu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    116761813 (JARID2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    116761813 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116761813 (JARID2)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116761813 (JARID2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     116761813 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 116761813
NCBI-ProteinID: XP_032503970
Ensembl: ENSPSNG00000008845
UniProt: A0A8C9E1A0
LinkDB
Position
11:complement(92244854..92489526)
AA seq 1235 aa
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGIAGSLKAVN
GLLGNGQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKTATNNASSSCQSTPRKGKAHKHVHNGHVFNGSSRSSREKEPVQK
HKSKEATPAKEKHSDPRADGRREQASTSHPPAAPSAGSSARGLPAHHHPPLHRSAQDLRK
QVSKVGGVTRMSSLGTSAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETK
PNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGHTVNGLKVSGRLNPKSCTKE
GGGRQLREGLRNSKRRLEEAPPGDKPQSPPKKMKGEAGAAEGPGRKAAPVPAEKAPPGGH
GKKEVPERSLERNRPKRVSAGKGPPGRQAHGKPDGAPCENRSTSQSEPLPRPNEAAAKAE
KGAGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLND
EMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLIN
EMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV
LMEKESLERRKGPLEGHTEQDYNRFHPLPRFEPKNGLINGVAHRNGFRSKLKEVGPAQLK
TGRRRLFAQEKEVVKEEDDRGILSDFHKCIYKGRSVSLTTFYRTARNILNMCFSKEPAPA
EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILR
HLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVV
HTLLQANGTPGLQMLESNVMISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYS
VSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISAL
LDELRDTELRQRRQLFEAGLHSSARYGSHEGSSAAPDGKKKPRKWLQLETSERRCQICQH
LCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKN
GSIENCLGKPTPKRGPRKRATVDVPPSRLAAASSS
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccatggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaatgcccagaagaggcagcatggtgaaggcattgctgggagcctgaaagccgtgaat
gggctccttggtaatggccagtctaagggattaggaccagcatcagaacagtcagagaat
gagaaggacgatgcatcccaagtgtcctcaactagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcaatcc
cagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccccctcca
gctactcaaatttctgacctctctaaaaggaagcctaagacagaagattttcttactttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagctctcag
gatgaggaggacgtcgaggaggaagatgatgagacagaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcgacccccaggaaaggaaaagcccacaagcatgttcac
aatggacatgttttcaatggttccagcaggtcatcacgggagaaggaacctgttcagaaa
cacaaaagcaaagaggccactccggcgaaggagaagcacagtgatccccgggccgacggc
cggagggagcaggcttccacgagccaccccccagcggccccctccgcgggctcctctgcc
agggggctccccgctcaccaccacccccctctgcatcggtcggctcaggacttacggaaa
caggtttctaaggtcggcggagtcactcgaatgtcatctctgggtacaagtgcagccagt
gccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacg
gtgacgaaggggactgtcacatacaccaaagccaagagggaactggtcaaggaaaccaaa
cctaatcaccacaagcccagttcagctgtcaaccacacaatctcagggaaaactgaaagt
agcaatgcaaaaacccgaaaacaggtgctatccctcgggggggcgtccaagtccaccggg
cacaccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaaggag
ggcggggggcggcagctgagggagggtctgcggaactccaagcggaggctggaagaggcg
cccccgggcgacaagccgcagtcgccccccaagaagatgaagggggaggcgggtgccgcg
gagggtcccggcaggaaggcggccccggtccccgcggagaaggcgccgcctggcggccat
gggaagaaggaagtgcccgagcggagcctggagaggaaccggccgaagcgggtgtcggcc
ggcaagggcccgccgggcagacaagcacacggcaagccggacggcgccccctgtgaaaat
cgttctacctcgcaatcggagcccctgccccggccgaacgaggcggcggccaaggccgag
aagggggccggcagggccgggtgggcggccatggacgagatccccgtcttgaggccgtcg
gccaaggagttccacgacccgctcgtctacatcgagtcggtgcgccctcaggtggagaag
tacggcatgtgcagggtgatcccgcccccggactggcggcccgagtgcaagctcaacgac
gagatgcgcttcgtcacgcagatccagcacatccacaagctgggtcggcgctggggcccc
aatgtgcagcggctggcctgcatcaagaagcacctcagatctcagggcatcaccatggac
gagctcccactcataggaggctgtgagctcgacctggcctgctttttccggctgattaac
gagatgggcggcatgcagcaagtgactgacctcaaaaaatggaacaaactagcagacatg
ctgcgcatccccaaaaccgcccaggaccggctggccaagctgcaggaggcctactgccag
tacctgctctcctatgactccctgtcccccgaggagcaccggcgcctggagaaggaggtg
ctgatggagaaggagagcctggagaggcgcaaggggcccctggagggccacacggagcag
gactacaaccgcttccacccgctgccccgcttcgagcccaagaacgggctcattaacggc
gtggcccacaggaacggcttccgcagcaagctgaaggaggtgggccctgcgcagctcaag
acggggcggcggcgactctttgctcaggaaaaggaggtggtgaaggaggaggacgacaga
ggcatcctcagcgacttccacaagtgcatatacaaggggaggtctgtttctctaacgact
ttttaccgaacagcaagaaatatcctgaacatgtgcttcagcaaggagcccgcaccagct
gaaatcgagcaagagtactggaggctcgtggaggagaaggactgccatgtggccgtgcac
tgtggcaaggtggacaccaacacccacggcagcggcttcccggtgggaaaatcagaaccg
ttttcaagacacggatggaacctcaccgtcctccccaataacacgggctccatcctgcgt
caccttggtgctgtgcctggagtgacaattccctggctaaatattggcatggtcttttct
acctcatgctggtctcgagaccaaaaccaccttccctacattgactacttacacactggt
gctgactgcatttggtattgcattcctgctgaggaggagaacaagctcgaggacgtggtg
cacaccctgctgcaagccaacggcacccccggcctgcagatgctggagagcaacgtcatg
atctccccggaggtgctgtgcagggaggggatcaaggtgcacaggaccgtgcagcagagc
ggccagtttgtcgtctgcttcccgggatcctttgtgtccaaagtgtgttgcggctacagc
gtctctgagaccgtgcacttcgccaccacccagtggacgagtatgggcttcgagacagcc
aaggagatgaaacgtcgccacatagctaagccattctccatggagaagttactctaccag
atcgcgcaagcggaagcgaaaaaggaaaacggtcccactctcagtaccatctcagccctc
ttggacgagctcagggacacggagctgcggcagcggcggcagctgttcgaggccggcctc
cactcctccgcccgctacggcagccacgagggcagcagtgccgcgcccgacgggaagaaa
aagcctcggaagtggctgcagctggagacctcggagaggaggtgtcagatctgtcagcac
ctgtgctacctgtccatggtcgtgcaggagaacgagaatgtggtcttctgcctggagtgt
gccctgcgccacgtggagaagcagaagtcctgccgcggcctgaagctcatgtaccgctac
gacgaggaacaaattatcagcctggtcaatcagatctgtggcaaggtatctggtaaaaac
ggcagcattgagaactgtctcggtaaacccacaccaaaaagagggccccgcaagagagcg
acggtggacgtgccgccctcccggctcgccgctgcctcctcctcgtga

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