Phocoena sinus (vaquita): 116761839
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Entry
116761839 CDS
T07759
Symbol
CCHCR1
Name
(RefSeq) coiled-coil alpha-helical rod protein 1 isoform X1
KO
K16760
coiled-coil alpha-helical rod protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116761839 (CCHCR1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116761839 (CCHCR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCR
MbeB_N
GatC
Motif
Other DBs
NCBI-GeneID:
116761839
NCBI-ProteinID:
XP_032504046
Ensembl:
ENSPSNG00000010754
LinkDB
All DBs
Position
11:80844433..80858223
Genome browser
AA seq
776 aa
AA seq
DB search
MFRPSGSTGLIPPSHFQVRPLPTLPRMAPTWVSDIPLVQPPAHQDVLERRPDNQRPQVTM
WGQEVSGKGQERGWRGRSVELAGSQALSQQAELISRQLRELRRLEEEVRVLRETSLQQKM
RLEAQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEEGSQRELEDVRRLHQEQLS
SLTQAHREALSSLTSKAGGLEKSLSSLETRRSGEAEELAAAQREAELLRKQLSKTQEDLE
AQVTLVENLRRYVGEQVPPEVHSQMWESERQELLETVQHLREDRASLRTTTELLRVRVQS
LTHVLCMQEEELARRVQPSDCLEPEFTKKCQSLLKRWREKVFALMVQLKAQELEHRDCVE
QLKGQVAELQEGVKTQCQEQAILQRSLQDKAAEVEVERMGAKALQTELSRTQEARRREQQ
QTATAEEQLKLVANAVSSFETWLQGAVAEVKRAAARLPGLSSRVSYAIRKVHTIRGLMAR
KLALAQLRQESCPQPPPATDMSLELEQLREERNRLDAELQLSAHIIQQEVGRAREQGEAE
RQKLSEVAQQLERELQRTQESLASLGLQLEAARQGQQESTAEAASLRQELTQQQEVYGQA
LQEKVAEVETRLREQLSESERRLNEARREHTKAVVSLRQIQRKATREKERNQELRRLQDE
ARKEEGQRLTQRLKELERDKNLMLATLQQEGLLSRYKQQRLLAVLPSPSDKGLPVESSLR
ASESSASAPPAAALCTKESIKGSLSVLLDDLQGLSEAISKEEAICEGDNQTSSVCL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaccttcaggttccactgggctgattcccccatcccacttccaagttcggccc
cttccaactctgccaagaatggctcccacgtgggtctcagacattcccctggttcagccc
ccagcccatcaagatgtcttagagaggcggccagataaccagagacctcaagtgaccatg
tggggacaggaagtttctggcaaagggcaggagcgagggtggagaggcaggtccgtggag
ctggcggggtcgcaggccctgagccagcaggctgagctgatctctcggcagctgcgagag
ctgcggcggctcgaggaggaggtccgggtgctgcgggagacctcgctgcagcagaagatg
aggctggaggcccaggccatggagctggaggcactggcacgggcagagaaggctggccgc
gctgaggccgagggcctgcgtgctgccctggctggggccgaggttgtccggaagaacctg
gaagaagggagccagcgggagctggaggacgttcggaggctgcaccaagagcagctctcc
tccctgacacaggctcaccgggaggctctttccagtttgactagcaaagctgggggcctg
gagaagtctctgagtagtctggagaccaggaggtcgggagaagccgaagagctggctgcg
gcccagagggaggccgagctgctgcggaagcagctgagcaagacccaagaggatttggag
gctcaggtgaccttggttgagaacctaaggaggtacgtgggggagcaggtccctcccgag
gtccacagtcagatgtgggaatcagagcgacaggagcttctagaaaccgtgcagcacctg
cgggaggaccgggccagcctgcgcaccaccacggagctgctgcgggtgcgcgtgcagagc
ctcacgcacgtcctctgcatgcaggaggaggagctggcccggagggttcagccttcagac
tgcctggagcccgagttcaccaagaagtgccagtccctactgaagcgctggcgggagaag
gtgtttgcccttatggtgcagctgaaggcccaggagctggagcacagagactgcgtggag
cagctgaagggacaggtggccgagctccaggaaggagtcaaaacccagtgccaggagcag
gccatcctgcagcgttccctgcaggacaaagctgcagaggtggaggtagagcggatgggt
gccaaggccctgcagacggagctgagccgcactcaggaggcccggcgccgggagcagcag
cagacagccacagcggaagagcagctgaagcttgtggccaacgctgtcagcagctttgag
acctggctccagggcgctgtggcggaggtgaagcgggccgcagcccggctgcccggcctc
agcagccgagtcagctatgccatccgcaaggtccacaccattcggggcctgatggctcga
aaactggcccttgctcagctgcgccaggagagctgcccccaacccccaccggccacagat
atgagcctggagttggagcagctgcgggaggaacggaaccgtctggacgcagaactgcag
ctgagtgcccacatcatccagcaggaggtgggccgggcccgggagcaaggggaggcggag
cggcagaagctgagcgaagtggcccagcagctggaacgggagctgcagcgcacccaggag
tccctggccagtttggggctgcagctggaggcggctcgccagggccagcaggagagcacg
gcggaggctgccagtctccggcaggagctgacccagcagcaggaggtctacgggcaagcg
ctgcaggagaaggtggccgaagtggagactcgactgcgggagcagctctcagaatcagaa
aggagactgaacgaggctcgcagggaacacaccaaggccgtggtctccctgcgccagatc
cagcgcaaagccacccgggaaaaggagcggaaccaggagctgcggcgcctgcaggatgag
gcccgaaaggaggagggacagcggctgacccagcgcctgaaggagctggagagagacaag
aacctcatgctggccaccttgcagcaagagggtctcctctcccgttacaagcagcagcga
ctgttggcagttcttccttccccgtcggataaggggttacctgtggagtccagcctcagg
gcctcagagtcttcagcgtctgcacctccggcagcggccctatgcaccaaggagtccatc
aaaggatccctttctgtcctgctcgatgacttgcagggcctgagtgaagccatttccaaa
gaggaagctatttgtgaaggagacaaccagacctcttctgtctgcctctga
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