Phocoena sinus (vaquita): 116761843
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Entry
116761843 CDS
T07759
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116761843 (POU5F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116761843 (POU5F1)
03021 Transcription machinery [BR:
psiu03021
]
116761843 (POU5F1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116761843 (POU5F1)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
116761843 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
Motif
Other DBs
NCBI-GeneID:
116761843
NCBI-ProteinID:
XP_032504064
Ensembl:
ENSPSNG00000010539
UniProt:
A0A8C9BSG2
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All DBs
Position
11:80833997..80839030
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AA seq
360 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGGDGPGGPEPGWVDPRTWMSFQGPPGGSGIGPGVGPGAEVWGL
PACPPPYDLCGGMAYCAPQVGVGLVPQGGLETPQPEGEAGAGVESSSGGASPEPCAAPAG
AVKLDKEKLEPNPEESQDIKALQKDLEQFAKVLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLESMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDCSQREDFEA
AGSPFSGGPVSFPLAPGPHFGTPGYGGPHFTTLYSSVPFPEGEAFPSVSVTTLGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctggcttccgacttcgccttctcccccccgccgggcggtggaggcgat
gggccgggagggccagagccgggctgggttgatcctcggacctggatgagcttccagggg
cctcccggtgggtcagggatcgggccgggggttgggcccggcgccgaggtgtggggtctt
cccgcgtgccctccgccctacgacttgtgcggagggatggcctactgtgcacctcaggtt
ggagtggggctggtgccccaaggcggcctggagacccctcagcccgagggcgaggcggga
gccggggtggagagcagctccgggggggcctccccggagccctgcgccgcccccgcgggc
gccgtgaagctggacaaggagaagctggagccgaacccagaggagtcccaggacatcaaa
gctcttcagaaagacctcgaacaatttgccaaggtcctaaagcagaagaggatcaccctg
ggatatacccaggccgatgtggggctcaccctgggggttctctttgggaaggtgttcagc
caaacgaccatctgccgttttgaggctttgcagctcagtttcaagaacatgtgtaagctg
cggcccctgctgcagaagtgggtggaggaagctgacaacaacgagaatctgcaggagata
tgcaaggcagagacccttgtgcaggcccggaagagaaagcggacgagtattgagaaccga
gtgagaggcaacctggagagcatgttcctgcagtgcccaaagcccaccctgcagcagatc
agccacatcgctcagcagctcgggcttgagaaggatgtggtccgagtgtggttctgcaac
cgtcgccagaagggcaaacgatcaagcagtgactgttcgcaacgagaggattttgaggct
gctgggtctcccttctcagggggaccagtatcctttcctctggcgccagggccccatttc
ggtaccccaggctatgggggtcctcatttcactacgctgtactcctcagtcccatttcct
gagggtgaggcctttccctcggtgtctgtcaccactctgggctcccccatgcattcaaac
tga
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