Phocoena sinus (vaquita): 116761852
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Entry
116761852 CDS
T07759
Symbol
OGG1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116761852 (OGG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116761852 (OGG1)
Enzymes [BR:
psiu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
116761852 (OGG1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116761852 (OGG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
116761852
NCBI-ProteinID:
XP_032504084
Ensembl:
ENSPSNG00000018217
LinkDB
All DBs
Position
11:complement(7058885..7076654)
Genome browser
AA seq
348 aa
AA seq
DB search
MFARSLLQRSMRHRTLASVPALWASIPCPRSELRLDLVLASGQSFRWREQSPAHWSGVLA
DQVWTLTQTEEHLYCTVYRGDKGRVDRPTLEELKAVRQYFRLDVSLAQLYHHWSSVDPHF
QEVAQKFQGVRLLQQDPIECLFSFICSSNNNIARITGMVERLCQTFGPRLLQLDDVTYHG
FPSLQALAGPQVEAQLRKLGLGYRARYVSASARAILEERGGLPWLQQLRKAPYEEAHKAL
CTLPGVGTKVADCICLMALDKPQAVPVDVHVWQIAQCDYSWHPTTKGPSPQANKELGSFF
RSLWGPYAGWAQATPPPHQVLFSADLRQPHRAQEPPAKRRKRCSGPEG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccgctcccttctgcagcgtagcatgagacatcgcactctagcctccgtcccg
gccctgtgggcctccatcccctgtccacgctctgagctgcgcctggacctggttctggct
tctggacagtcattccggtggagggagcagagccctgcgcactggagtggcgtgctggcc
gaccaggtatggacactgacccagactgaggagcatctttactgcactgtgtaccgaggg
gataagggccgggttgacaggcccacactggaagagctaaaggccgtgcgacagtacttc
cggctggatgtcagccttgctcagctgtatcaccattggagttctgtggacccccacttt
caagaggtggctcagaaattccaaggtgtgcgactcctgcaacaggatcccatcgagtgt
ctcttctccttcatctgttcctccaacaacaacattgcccgcatcactggcatggtggag
cggctctgccagaccttcggacctcggctcctccagcttgatgatgtcacctaccatggc
ttccccagcttgcaggccctggctgggccacaggtggaggctcagctcaggaagctgggc
ctggggtatcgtgcccgctatgtgagtgccagtgcccgagccatcctggaagaacggggt
ggacttccctggctgcagcagctgcgcaaggcgccctacgaggaggcccataaggccctc
tgcaccctgcctggggtaggcaccaaggtggccgactgcatctgcttgatggccctagac
aagccccaggctgtgcccgtggatgtccacgtgtggcagatcgctcaatgtgactacagc
tggcaccccaccaccaagggtccaagcccccaggccaacaaggaactgggaagctttttc
cggagcctgtggggaccttatgctggctgggcccaagcaactcctcccccccaccaggtg
ctgttcagtgctgacctgcgccaaccccaccgagctcaggagccaccagcaaagcgcaga
aagagatgctcagggccggaaggctag
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