Phocoena sinus (vaquita): 116761877
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Entry
116761877 CDS
T07759
Symbol
BRPF3
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116761877 (BRPF3)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
116761877 (BRPF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PHD_2
PWWP
Patatin
PHD
DNA_topoisoIV
Motif
Other DBs
NCBI-GeneID:
116761877
NCBI-ProteinID:
XP_032504162
Ensembl:
ENSPSNG00000019465
LinkDB
All DBs
Position
11:66001055..66106608
Genome browser
AA seq
1669 aa
AA seq
DB search
MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKI
ITEDELTAQDITECNSNKENSEQPQFPVKSKKPSSKGKKKESCSKHASGTSFHLPQPSFR
MVDSGSQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVS
ADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDECHNSNVILFCDICNLAVH
QECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGHWAHVVCAIWIPEVC
FANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFM
KIEPMRETSLNGTIFTVRKTAYCEAHSPPGAATARRKGDSPGSLSEVGDEEGLKEGCGEE
EEKEEVEEEEEDEGQGGVGGPLKGVSKKNKMTLKQRIKKEPEEVGRDTPSTVPMVTVPQI
PSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQREQD
EKTNAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAMELELMPFNVLLR
TTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYGTLEEFEEDFN
LIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERGTHLPESPKLEDF
YRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRRVRLLRREINALR
QKLAQPPPLQLASLNKTVSNGELPAGPRGDVAVLEQAPQEEPEDDGDRDDSKMPPPPTLE
PTGPAPSLSEQESPPDPPTLKPINDSKPPSRFPKPRKVEEDELLEKSPLQLGNEPLQRLL
SDNGINRLSLMTPDTSPAGAPLSGVGRRTSVLFKKAKNGVKLQRSPDRALENGEDHGAVG
SPASPTSIEDEQHSRKRPRSRSCSESEGERSPQQGEETGVTNGFGKHTESGSDSECSLGL
SGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLMPFEDRGDLEPLE
LVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLF
FDNKRTWTSEKTPQQADGTGPGVPEEDEYLRVLNVGVAEVKKSFLGPLSPSCKMVQMMRQ
FLYRVLPEDSYKVATGKLHVSLTRFTDGESVVVSEYTSKEELIEALYCSCFVPVYCGLIP
PTYRGVRYIDGAFSGMQPCSFWTDSITISTFSGQQDICPRDCPAIFCDFLMFNCSFQFSL
ENITRMTHALFPPDLVILHNYYYRGYEDAVSYLRRLNAAYLNSPSKRVIFPWVEVYCQIE
LALGNECPEHCQPSLQTERASPEESRQLHTQWAPKGERKGGRGPPLSPPVQTPESTCEWP
VESPVSPPASPLASSPSHSPTDLPPVSLPAVHFLPSSTPGLSPVSPSQQVQLTGSPLRSP
PPQSSMSSRTSLGPSAVGTSPTLPQCSSSASPAQPPVEELGPEQPQGLLPAHSTPLCSPL
PRQFGSPTDLIPAGSRNTAALRCGTPQCVPGDRTLPVLSQDTVVTSEPCCPSFLSALTCF
FLVTVRANTSPYNALYTEKTAPLPSELDCQLLECCHNTLISFEQLTANC
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcctcgccggaagtcacggcagaatgccgagggccggcgctccccatccccc
tatagtctgaagtgctcacccactcgggagaccctgacatatgcccaggcccaacggatc
gtcgaggtggacattgatggacgtctgcatcgtattagcatctatgacccactcaagatc
atcacagaggatgagttgactgcccaggatatcaccgaatgcaatagtaacaaggaaaac
agtgagcagcctcagttccctgtcaagtccaaaaaaccctcatccaagggcaagaagaag
gagtcctgctccaagcatgcatccggcacttccttccacctcccacaacccagcttccgc
atggtggactcaggcagtcaaccagaagcacccccgctgcctgctgcctactaccgctac
attgagaagccacctgaagacctggatgcagaagtagagtacgacatggatgaggaggac
cttgcctggctggacatggtaaatgagaagcggcgagtagatgggcacagtttggtgtcg
gcagatacctttgagctgctggtggaccggcttgagaaggagtcgtacttggagagtcga
agcagtggggcccaacagtcactcattgacgaagatgctttctgctgtgtatgcctggat
gacgaatgccacaacagcaacgtcattctcttctgtgacatctgcaacctggccgtacac
caggagtgctatggcgtcccttacatccccgagggccagtggctatgccgctgctgtcta
cagtctccctcccggcctgtggattgcgtcctctgccccaacaagggtggcgccttcaaa
cagaccagtgatgggcactgggcccacgtggtgtgtgccatctggatccctgaagtctgc
tttgctaacaccgtgttcctggagcctattgagggcatcgacaacatcccacctgcccgc
tggaaactaacctgctatatctgcaagcagaaggggctgggtgcagccatccagtgccat
aaggtgaactgctacacggccttccatgtgacgtgtgcacagcgggctgggctcttcatg
aagattgagcctatgcgtgagaccagcctcaatggcaccatcttcacagtgcgcaagacc
gcctactgtgaggcccactcgccgccaggtgccgccactgctaggaggaagggcgactcc
ccaggaagtctcagtgaggttggggatgaagaagggctgaaggaaggctgtggggaggaa
gaagagaaggaagaggtagaagaggaggaggaagatgaaggccaaggtggggtaggtggc
cccctcaagggagtgtccaagaagaacaagatgactttgaagcaaaggatcaagaaggag
ccagaggaagtgggccgagacacaccctccactgtccccatggtcactgtcccacagata
ccctcttacaggttgaacaagatctgtagtggtctctcctttcagaggaaaaaccagttc
atgcagcggcttcacaactactggctgttgaagcggcaggcacggaacggtgtccccctc
atacggcgcctgcactcccacctgcagtcccaaaggaatgctgagcagcgggagcaggac
gagaagacaaatgcagtgaaggaagagctgaaatactggcagaagctccggcacgacttg
gagcgggcacggctgctgattgagctgattcggaaaagagaaaagctcaagcgggagcag
gtcaaggtccagcaggccgccatggagctggagcttatgccgttcaacgttctgctgagg
acaacactggacttgctgcaggagaaggatcccgcacacatctttgccgagcctgtcaac
ctgagtgaggttccagattacctggaattcatatccaagccaatggatttttctactatg
aggcggaagctggagtcccacctgtacggcaccttggaggagtttgaggaggactttaac
cttatagttaccaactgcatgaagtataatgctaaagacacaattttccaccgagcagct
gtccgcctgcgggacctgggaggggccattctgcggcacgcccggcggcaggcagagaac
atcggctatgaccccgagaggggcacccacctgcccgagtcacccaaattggaggacttt
taccgcttctcctgggaagacgtggacaacatcctcatcccagagaaccgggcccacttg
tccccagaggtgcagctgaaggagctgctggaaaaactggacctggtgagtgccatgcgg
tccagtggggcccggacccgccgtgtccgcctgctacgccgggagatcaatgcccttcgg
cagaagctggcgcagccgccaccactgcagctggcatcgctaaacaagactgtgtccaat
ggggagctgccagcagggccccggggggatgtggctgtgctggagcaggccccgcaggag
gagccagaagacgatggggacagagatgactccaaaatgcctcccccaccaaccctggag
cctactgggcctgcgccttccttgtctgagcaagaatcccctccggatccccccactctg
aaacccatcaatgatagcaaacctccaagccgattcccaaagccaagaaaagtggaagaa
gatgagcttttggaaaaatcacctctgcagctagggaatgagcccttgcaacgcctgctc
agtgacaatggcattaatagattatccctcatgacccccgatacatcccccgcaggcgcc
ccactcagtggcgtgggccgtcgcacatcagtcctcttcaagaaggccaagaatggggtt
aaactacagaggagcccagacagggccctggagaacggtgaggaccatggcgcagtgggc
tctcctgcgtctcccaccagcatcgaggatgaacagcactcccggaagcggccaaggagc
aggagctgtagtgagagcgaaggggagaggtccccccagcagggggaagagacaggtgtg
accaacggctttggaaaacacactgaaagcgggtctgactcagaatgtagtttgggtcta
agtggtggactggcatttgaagcttgcagtggtctgacaccccccaaacgcagccgaggg
aagccagccctgtctcgagtgcccttcctggaaggtgtgaacggagactctgactacaac
ggctcaggcagaagcctcctgatgccctttgaagaccgtggagacctggagcccctggag
ctggtgtgggccaagtgccgaggttatccctcctaccccgccttgatcatcgatcccaag
atgccccgggagggccttctgcacaatggcgtccccatccccgtccccccactggatgtg
ctgaagctgggagagcagaaacaggccgaggctggagagaagctcttccttgtcctcttc
tttgacaataaacgcacctggacatctgagaaaaccccccagcaagcagatggaactgga
cctggagttccagaggaagatgagtacctccgagtcctcaatgtgggtgtggccgaggtg
aagaaatccttcttggggcccttgtccccgtcctgtaagatggtgcagatgatgaggcag
tttctgtaccgggtcctgcctgaggactcctacaaggtcgccacggggaagctccacgtg
agcctcacccgcttcacggatggagagagtgttgtggtttcagaatatacatccaaagaa
gagctcatcgaggccctgtactgcagctgctttgtccctgtgtactgcggcctcattcct
ccaacttaccgcggtgtgcggtacatcgacggggccttctcgggcatgcagccctgctcc
ttctggacggactccatcaccatctccaccttcagtggtcagcaggacatctgcccgcgg
gactgccccgccatcttctgtgacttcctcatgttcaactgctctttccagttctccctg
gagaacatcaccaggatgacccatgccctgttccccccagacctggtgatcctgcacaat
tattactacagagggtatgaagatgctgtttcgtacttgaggcggctgaatgctgcttac
cttaattctccttccaagagagtgattttcccctgggtagaagtgtactgccagatagaa
ctcgcccttggcaatgagtgccctgaacactgtcaaccaagcctccaaacagagcgggcc
agtccagaagaatccagacaacttcacacacaatgggctcccaaaggggaaagaaaaggt
ggccgtggtccacctctgtccccacctgtgcagacacctgaatccacatgtgagtggcct
gtggagtcacctgtttcaccacctgcatcgccactggcctcatcaccatcacattctcca
actgacttgccacctgtatcactcccagctgtgcacttcctccccagctcaacacctggg
ctgtcacccgtatcaccatcacagcaggtacaactgactggatcgccactcagatcccca
cccccccagtcatctatgtcatccaggacgtccctggggccttccgctgtgggcacatct
ccaacattgccccaatgttcttcttcagcatcacctgcacagccacctgtggaggaactg
ggcccagaacagccccaaggtctgctccctgcccactcgactcctctctgctctccactt
ccaagacagtttgggtcacctacagacctcatcccagccggatcaaggaatacagctgcc
ctgaggtgtggaactccccagtgtgtccctggagaccggacactgcctgttctgtcccag
gatactgtggtgacctctgagccctgttgccccagcttcctttctgccctcacctgcttc
ttcctggtcacggtcagggccaacactagcccatataatgccttgtacactgagaaaaca
gcaccccttccttcagaacttgactgccagctgcttgaatgttgtcataatacactgatt
tcgtttgaacaattgactgccaactgctag
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