Phocoena sinus (vaquita): 116761878
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Entry
116761878 CDS
T07759
Symbol
EDEM1
Name
(RefSeq) ER degradation-enhancing alpha-mannosidase-like protein 1
KO
K10084
ER degradation enhancer, mannosidase alpha-like 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116761878 (EDEM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
psiu04091
]
116761878 (EDEM1)
Lectins [BR:
psiu04091
]
M-type lectins
116761878 (EDEM1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
116761878
NCBI-ProteinID:
XP_032504164
Ensembl:
ENSPSNG00000020473
UniProt:
A0A8C9CXE9
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Position
11:complement(10964920..10992148)
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AA seq
660 aa
AA seq
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MQWRALVLGLVLLRLGLHGVLWLVFGLGPSLGFYQRFPLSFGFQRLRGPDGPESPASGPA
GRPGTPGGPSGPSWLQPQVPGAAAGRRRAPRRPGPDVCGPGHWGYVLGGRGRGRDEYEKR
YSGAFPPQLRAQMRDLARGMFVFGYDNYMAHAFPEDELNPIHCRGRGPDRGDPSNLNIND
VLGNYSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFDKDSTVQVFEATIRVLGSLLSA
HRIITDSKQPFGDMTIKDYDNELLHMARDLAVRLLPAFENTRTGIPYPRVNLKTGVPPDS
NNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWNLRSNDTGLLGNVVNIQTGH
WVGKQSGLGAGLDSFYEYLLKSYILFGEKEDLEMFNAVYKSIQNYLRRGREACNEGEGDP
PLYVNVNMFNGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYN
WQLQAPDVLFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEKYTKVKCGYATLHHV
IDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYMFTTEGHIVSVDAHLRESPWKE
FFSEEGGRDPVGKSGHRPRPHELKVINSSSNCNRVPDERRYSLPLKSVYMRQIDQMVGLI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggcgagcgctcgtcctggggctggtgctcctccggcttggcctccacggagtg
ctgtggctcgtcttcgggctggggcccagcctgggcttctaccagcgcttcccgctcagc
ttcggcttccagcgcctgaggggccccgacggccccgagtctcccgcctcggggcccgcg
ggccggcccgggacgcccggggggccgtcggggccatcgtggctgcagccgcaggtccct
ggggcggcggcggggcggcggcgggctccgcggcggcccgggccggacgtctgcggccca
ggccactggggctacgtgctgggcggccggggccgcggccgggacgagtatgagaagcgc
tacagcggcgccttcccgccgcagctgcgcgctcagatgcgcgacctggcgcggggcatg
ttcgtgttcggctacgacaactacatggcgcacgccttccccgaggacgagctcaacccc
atccactgccgcggccgaggacccgaccgcggggacccttcaaatctgaacatcaacgat
gtcctagggaattattcactgactcttgttgatgcgttggatacacttgcaataatggga
aattcatccgagttccagaaagcagtcaagttagtgatcaacacagtgtcatttgacaaa
gattccaccgtccaagtctttgaggccacgataagggtcctgggaagccttctttctgcc
cacagaataataactgactccaagcagccctttggtgacatgacgattaaggattatgat
aatgagttgttgcatatggctcgcgacctggcggtgcggctcctccctgcctttgaaaac
accaggacagggatcccctaccctcgggtgaatctaaagacaggcgttcctcctgacagc
aataatgagacgtgcacggccggcgctggttccctgctggtggaatttgggattctgagt
cgactgctgggggattccacgtttgagtgggtggccaggcgagccgtgaaagccctttgg
aacctgcggagcaacgatacgggattgttaggcaatgttgtgaacattcagacgggccat
tgggtcggaaagcagagtggcttgggtgccggactggactccttctatgaatacctcttg
aaatcttacattctctttggagaaaaagaagacctagaaatgtttaatgctgtatataag
agtattcagaactacttaagaagaggtcgggaagcctgtaacgagggggaaggggacccg
cccctctacgtcaacgtgaacatgttcaacgggcagctgatgaacacgtggattgactct
ctgcaggcgttcttcccaggactgcaggttctgataggagacgtggaagacgccatctgc
ctgcacgccttctactacgccatatggaagcgctacggggccctccccgagaggtacaac
tggcagctgcaggcccccgacgtgctcttctacccactgagacctgagctggtggagtct
acgtatctcctctaccaggcaaccaagaatcccttctacctccatgtaggaatggacatt
ctgcagagtctggaaaagtacacaaaagtcaagtgtggctatgctacgttgcatcatgtc
atcgacaaatccaaagaggaccggatggagagcttcttcctcagcgagacctgtaaatac
ttgtatctgctctttgatgaggagaatccagtacacaaatctggaaccagatacatgttt
acaactgagggacacattgtatctgtggacgcacatctccgggagtcaccctggaaggag
ttcttttctgaagagggagggcgggacccagtgggaaagtcggggcacaggccgagacct
catgagctaaaagtcatcaactccagctccaattgcaatcgtgttcctgacgagaggcga
tattccctgcccttaaagagcgtctacatgcgacagattgaccagatggttggcttgatt
tga
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