Phocoena sinus (vaquita): 116762095 Help Entry 116762095         CDS       T07759                                  Name (RefSeq) toll-like receptor 9 isoform X1   KO K10161   toll-like receptor 9 Organism psiu  Phocoena sinus (vaquita) Pathway psiu04620   Toll-like receptor signaling pathway psiu05132   Salmonella infection psiu05142   Chagas disease psiu05143   African trypanosomiasis psiu05144   Malaria psiu05152   Tuberculosis psiu05162   Measles psiu05168   Herpes simplex virus 1 infection psiu05235   PD-L1 expression and PD-1 checkpoint pathway in cancer Brite KEGG Orthology (KO) [BR:psiu00001]  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     116762095  09160 Human Diseases   09161 Cancer: overview    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     116762095   09172 Infectious disease: viral    05162 Measles     116762095    05168 Herpes simplex virus 1 infection     116762095   09171 Infectious disease: bacterial    05132 Salmonella infection     116762095    05152 Tuberculosis     116762095   09174 Infectious disease: parasitic    05144 Malaria     116762095    05142 Chagas disease     116762095    05143 African trypanosomiasis     116762095  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:psiu04054]     116762095    04090 CD molecules [BR:psiu04090]     116762095 Pattern recognition receptors [BR:psiu04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    116762095 CD molecules [BR:psiu04090]  Proteins   116762095 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_1 LRR_12 LRR_14 LRR_6 LRR_EndoS TIR LRR_9 LRR_LRWD1 LRR_Zer-1 TIR_2 Motif Other DBs NCBI-GeneID:  116762095 NCBI-ProteinID:  XP_032504729 Ensembl:  ENSPSNG00000006800 ENSPSNG00000006840 LinkDB All DBs Position 11:36677805..36695500 Genome browser AA seq 1071 aa AA seqDB search MGTGQRNRNLLGGLGALRETRGGGGAGEVELGPCPHTVPTPQGPCRARHPLSLLVQAVAL AAALAQGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSAAAPRANVTSLSLLSNRIHHLHD SDFAHLSSLRILNLKWNCPPAGLSPMHFPCHMTIEPNTFLAVPTLEELHLSYNGITSVPA LPRSLVSLSLSHTNILVLDPTHFAGLHALRFLYMDGNCYYKNPCHRTLEVAPGALLGLGN LTHLSLKYNNLTEVPRLLPPSLETLLLSYNHIVTLAPEDLANLTALRVLDVGGNCRRCDH ARNPCMECPKHFPKLHPDTFGHLSRLEGLVLKDSSLYSLDNRWFRGLGRLQVLDLSENFL YDCITKTTAFRGLARLRSLNLSFNYHKKVSFAHLHLAPSFRGLLSLKELDMHGIFFRSLS ETTLQPLTRLPMLQILRLQMNFINQAQLSIFGAFPGLLYVDLSDNRISGAARPAATLGEA DSGPKIWLPSRDLAPGPLDTLSLEDFMLSCKNFSFTLDLSRNNLVSIQPEMFARLSRLQC LRLSHNSISQAVNGSQFVPLTSLRVLDLSHNKLDLYHGSSFTELPRLEALDLSYNSQPFS MQGVGHNLSFVAQLRSLRYLSLAHNDIRSRVSQQLCSASLQALDFSGNALSQMWAEGDLY LRFFQGLRSLVLLDLSQNRLHTLLPCTLDNLPKSLKLLRLRDNNLGFFNWSSLALLPQLE TLDLAGNQLKALSNGSLPSGTRLRKLDLSGNSIGFVTPGFFVLAKRLEELNLSANALKTV EPSWFGSLAGTLKILDVSTNPLHCACGAAFVDFLLKVQAAVPGLPSRVKCGSPRQLQGRS IFAQDLRLCLDEALSWDCFGLSLMVVALGLAVPMLHHLCGWDLWYCFHLCLAWLPRWGQR RGADALFYDAFVVFDKAQSAVADWVYNELRVQLEERRGRRALRLCLEERDWLPGKTLFEN LWASVYSSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILRPEAYRSRYVR LRQRLCRQSVLLWPHQPSGQGSFWAQLGTALTRDNRHFYNRNFCRGPTTAE NT seq 3216 nt NT seq  +upstreamnt  +downstreamnt atgggcactgggcagagaaacaggaacctccttggagggctgggagccctgcgggagacc cggggcgggggtggggcaggagaggtggagctggggccgtgccctcacacggtgcccacc ccacagggcccctgccgtgcccggcaccccctttctctcctggtgcaggcggtggcactg gctgcagccctggcccagggcaccctgcctgctttcctgccctgtgaactccagccccac ggcctggtgaactgcaactggttgttcctgaagtccgtgccacacttctcggctgcggcg ccccgggccaatgtcaccagcctctctttgctttccaaccgcatccaccacctgcatgac tccgacttcgcccacctgtccagcctgcggatcctcaacctcaagtggaactgcccgccg gccggcctcagccccatgcacttcccctgccacatgaccatcgagcccaacaccttcctg gccgtgcccaccctcgaggagctgcacctgagctacaacggcatcacgtccgtgcccgcc ctgcccaggtccctcgtgtccctgtcgctgagccacactaacatcctggtgctagacccc acccacttcgccggcctacacgccctgcgctttctgtacatggacggcaactgctattac aagaacccctgccaccggacactggaggtggccccgggcgccctccttggcctgggcaac ctcacgcacctgtcgctcaagtacaacaacctcacggaggtgccccgcctcctgcccccc agcctggagaccctgctgttgtcctataaccacattgtcaccctggcgcccgaggacctg gccaatctgaccgccctgcgcgtgctggacgtgggtgggaactgccgccgctgtgaccat gcccgcaacccctgcatggagtgtccgaagcacttccccaagctgcaccccgacaccttc ggccacctgagccgcctcgaaggcctggtgttgaaggacagttctctctacagcctggac aacagatggttccgtggcctgggcaggctccaagtgctagacctgagtgagaacttcctc tatgactgcatcaccaagaccacggccttccggggcctggcccggctgcgcagcctcaac ctgtccttcaattaccacaagaaggtgtccttcgcccacctgcacctggcgccctccttc aggggcctgctctccctgaaggagctggacatgcacggcatcttcttccgctcgctcagc gagaccacgcttcagccgctgacacgcctgcccatgctacagattctgcgtctgcagatg aacttcatcaaccaggcccagctcagcatcttcggggccttcccgggcctgctctacgtg gacctgtcggacaaccgcatcagtggagctgcaaggccggcagccaccttgggggaggcg gacagtgggccgaagatctggctgccgtccagggacctcgctccaggcccactggacact ctcagtttggaggacttcatgctaagctgcaagaacttcagcttcaccttggacctgtca cggaacaacctggtgtcgatccagccagagatgtttgcccgcctctcgcgcctccagtgc ctgcgcctgagccacaacagcatctcgcaggcggtcaacggctcccagttcgtgccgctg accagcctgcgggtgctggacctgtcccacaacaagctggacctgtaccacgggagctcg ttcacggagctgccgcgactggaggcgctggacctcagctacaacagccagcctttcagc atgcagggcgtgggccacaatctcagcttcgtggcccagctgcgctccctgcgctacctc agcctggcacacaacgacatccgtagccgtgtgtcccagcagctctgcagcgcctcgctg caggccctggatttcagtggcaatgccctgagccagatgtgggctgagggagacctctat ctccgcttcttccaaggcctgagaagcctggtcctgctggacctgtcccagaaccgcctg cataccctcctgccatgtaccctggacaacctccccaagagcctgaagctgctgcgtctc cgtgacaataacctgggcttcttcaactggagcagcctggccctcctgccccagctggaa acactggacctggcgggaaaccagctgaaggccctgagcaatggcagcctgccgtctggt acccggctccggaagttggacctcagcggcaacagcattggcttcgtgacccccggcttc tttgtgctcgccaagcggctggaagagctcaacctcagtgccaacgccctcaagacggtg gagccctcctggtttggctccctagcgggcaccctgaaaatcctagacgtgagcaccaac ccgttgcactgcgcctgtggggcggccttcgtggacttcctgctgaaggtgcaggctgcc gtgcccgggctgcccagccgagtcaagtgtggcagtccgcgccagctccagggccgcagc atcttcgcacaggacctgcgcctctgcctggacgaggccctctcctgggactgttttggc ctctccctgatggtggtggccctgggcctggctgtgcccatgctgcaccacctctgcggc tgggacctctggtactgcttccacctgtgcctggcctggctgccccggtgggggcagcgg cggggcgcagatgccctgttctacgatgccttcgtggtcttcgacaaggcacagagcgca gtggccgactgggtgtacaacgagttgcgggtgcagctggaggagcgccgtgggcgccgg gcactccgcctatgcctggaggagcgtgactggctacccggcaagacgctctttgagaac ctgtgggcctcggtctatagcagccgcaagaccttgtttgtgctggcccacacggaccgg gtcagcggcctcttgcgtgccagcttcctgctggcccagcagcgcctgctggaggaccgc aaggacgtcgtggtgctggtgatcctgcgccccgaagcctaccgctcccgctacgtgcgg ctgcgccagcgcctgtgccgccagagcgtcctcctttggccccaccagcccagtggccag ggcagcttctgggcccagctgggcacagccctgaccagggacaaccgccatttctacaac cggaacttctgccggggccccacgacagccgaatag

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