KEGG   Phocoena sinus (vaquita): 116762109
Entry
116762109         CDS       T07759                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116762109 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psiu03041]
    116762109 (CDC5L)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116762109 (CDC5L)
Spliceosome [BR:psiu03041]
 Complex B
  Other components
   Prp19 complex
    116762109 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    116762109 (CDC5L)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    116762109 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 116762109
NCBI-ProteinID: XP_032504763
Ensembl: ENSPSNG00000021910
UniProt: A0A8C9ED61
LinkDB
Position
11:72961049..73004764
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGS
EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
LGLPAPKNDFEIVLPENAEKELEDREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KTIGFGTNNAEHIAYLEHNTYEKFSKEDLKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
EKELQHRYADLLLEKETLKAKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgcctcgaattatgatcaaggggggcgtgtggaggaatactgaggatgaaattttgaag
gcagcggtaatgaaatatgggaaaaaccagtggtctaggattgcctcactgctgcataga
aaatcagcaaagcagtgcaaagccagatggtatgagtggctggatcccagcattaagaaa
acggaatggtccagagaagaagaggaaaaactcttgcacttggccaagttgatgccaact
cagtggaggaccattgctccaatcattggaagaacagctgcccagtgtttggaacactat
gaatttcttctggataaagctgcccagagagacaatgaagaggaaacaacagatgatcca
cgaaaacttaaacctggagaaatagatccaaatccagaaacaaaaccagcacggcctgat
ccgattgatatggatgaggatgaattggagatgctttctgaagctagagcccgcctggct
aatactcagggaaagaaagccaagaggaaagcgagggagaaacagttggaagaagcaagg
cgtcttgctgccctccaaaagagaagagaacttcgagcagctggcatagaaattcagaag
aaaagaaaaaagaagagaggagttgattataacgctgaaatcccatttgaaaaaaagcct
gctcttggtttctatgatacttctgaggaaaactaccaggctcttgatgccgatttcaga
aagttaagacaacaggatcttgatggggagctgagatctgaaaaagaaggacgagataga
aaaaaagacaagcagcatttgaaaaggaaaaaagaatctgatttaccgtcagcaattctt
caaactagtggtgtttctgaatttactaaaaagagaagcaaactagtactacctgcccct
cagatttcagatgcagaactccaggaagttgtaaaagtaggccaagcaagtgaaattgca
cgtcaaactgctgaggaatctggcataacaaactcggcttccagtactctcttgtctgag
tacaatgtcaccaacaacagcatcgctttgagaacaccacgaacaccagcttcccaggac
agaattctgcaggaagcccaaaacctcatggctctgaccaacgtggacaccccattaaaa
ggtggacttaacacccctttgcacgagagcgacttctcaggtgtgactccacagcggcag
gttgtacagactccaaacacagttctttctaccccattcagaactccttctcatggatct
gaaggcctgactccccggagtggaacaactcccaaaccagttattaactccaccccgggt
agaacgcctcttcgagacaagttaaacattaatcccgaggatggaatggcagactacagt
gatccctcttatgtgaagcagatggaaagagaatctcgtgaacacctccgtttagggttg
ttgggccttcctgcccctaagaatgactttgaaattgttctaccagaaaatgccgagaag
gaactggaagaccgtgaaatagatgatacttacattgaagatgctgccgatgtggacgca
cggaagcaggccatacgagatgcagagcgtgtaaaggaaatgaaacgaatgcacaaagct
gtccagaaagatctgccaagaccatcagaagtaaatgaaactattctaagacccttaaat
gtagaaccacctctgacagatttacagaaaagtgaagaactaattaaaaaagaaatgatc
acaatgcttcattatgaccttctacatcacccttatgaaccatctggaaataaaaaagga
aaaactataggatttggtaccaataatgcagagcacattgcctatctggaacataacact
tatgaaaagttttccaaagaagacctgaaaaaggcccaggatgttctggtacaggagatg
gaagtggtaaaacaaggtatgagccacggagaactctcaagtgaagcttataaccaggtg
tgggaagaatgctacagtcaagttttatatcttcctgggcagagccgctacacacgggcc
aacctagctagcaaaaaggacagaattgagtcactggaaaagaggcttgagataaacagg
ggtcacatgacgacagaagccaagagagctgcaaagatggaaaagaagatgaaaattttg
cttgggggttaccagtctcgtgcaatggggctcatgaaacagttgaatgacttatgggac
caaattgagcaggcttacttggagttacgcacttttgaagaactcaagaaacatgaagat
tctgctattccccggaggctagagtgtctaaaagaagatgttcagcgacaacaggaaaga
gaaaaggaacttcagcatagatatgctgatttgctgctggagaaagagactttaaaggcc
aaattctga

DBGET integrated database retrieval system